Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS07700 and ABZR87_RS07705 are separated by 88 nucleotides ABZR87_RS07705 and ABZR87_RS07710 are separated by 31 nucleotides ABZR87_RS07710 and ABZR87_RS07715 overlap by 14 nucleotides
ABZR87_RS07700: ABZR87_RS07700 - peptidylprolyl isomerase, at 1,632,927 to 1,634,429
_RS07700
ABZR87_RS07705: ABZR87_RS07705 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 1,634,518 to 1,635,534
_RS07705
ABZR87_RS07710: ABZR87_RS07710 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 1,635,566 to 1,636,411
_RS07710
ABZR87_RS07715: ABZR87_RS07715 - DMT family transporter, at 1,636,398 to 1,637,303
_RS07715
Position (kb)
1634
1635
1636 Strain fitness (log2 ratio)
-2
-1
0
1 at 1633.581 kb on + strand, within ABZR87_RS07700 at 1633.602 kb on + strand, within ABZR87_RS07700 at 1633.650 kb on + strand, within ABZR87_RS07700 at 1633.651 kb on - strand, within ABZR87_RS07700 at 1633.651 kb on - strand, within ABZR87_RS07700 at 1633.927 kb on - strand, within ABZR87_RS07700 at 1634.092 kb on - strand, within ABZR87_RS07700 at 1634.320 kb on - strand at 1634.407 kb on - strand at 1634.427 kb on + strand at 1634.427 kb on + strand at 1634.427 kb on + strand at 1634.427 kb on + strand at 1634.427 kb on + strand at 1634.427 kb on + strand at 1634.427 kb on + strand at 1634.427 kb on + strand at 1634.428 kb on - strand at 1634.483 kb on - strand at 1634.712 kb on + strand, within ABZR87_RS07705 at 1634.789 kb on - strand, within ABZR87_RS07705 at 1635.144 kb on + strand, within ABZR87_RS07705 at 1635.144 kb on + strand, within ABZR87_RS07705 at 1635.280 kb on - strand, within ABZR87_RS07705 at 1635.280 kb on - strand, within ABZR87_RS07705 at 1635.331 kb on + strand, within ABZR87_RS07705 at 1635.331 kb on + strand, within ABZR87_RS07705 at 1635.332 kb on - strand, within ABZR87_RS07705 at 1635.332 kb on - strand, within ABZR87_RS07705 at 1635.332 kb on - strand, within ABZR87_RS07705 at 1635.361 kb on + strand, within ABZR87_RS07705 at 1635.911 kb on + strand, within ABZR87_RS07710 at 1635.912 kb on - strand, within ABZR87_RS07710 at 1635.912 kb on - strand, within ABZR87_RS07710 at 1635.912 kb on - strand, within ABZR87_RS07710 at 1635.912 kb on - strand, within ABZR87_RS07710 at 1635.912 kb on - strand, within ABZR87_RS07710 at 1635.912 kb on - strand, within ABZR87_RS07710 at 1636.067 kb on + strand, within ABZR87_RS07710 at 1636.067 kb on + strand, within ABZR87_RS07710 at 1636.067 kb on + strand, within ABZR87_RS07710 at 1636.068 kb on - strand, within ABZR87_RS07710 at 1636.068 kb on - strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.070 kb on + strand, within ABZR87_RS07710 at 1636.071 kb on - strand, within ABZR87_RS07710 at 1636.071 kb on - strand, within ABZR87_RS07710 at 1636.071 kb on - strand, within ABZR87_RS07710 at 1636.249 kb on + strand, within ABZR87_RS07710 at 1636.250 kb on - strand, within ABZR87_RS07710 at 1636.250 kb on - strand, within ABZR87_RS07710 at 1636.250 kb on - strand, within ABZR87_RS07710 at 1636.399 kb on + strand at 1636.400 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,633,581 + ABZR87_RS07700 0.44 -0.3 1,633,602 + ABZR87_RS07700 0.45 +0.3 1,633,650 + ABZR87_RS07700 0.48 +0.3 1,633,651 - ABZR87_RS07700 0.48 -2.1 1,633,651 - ABZR87_RS07700 0.48 -0.1 1,633,927 - ABZR87_RS07700 0.67 +1.1 1,634,092 - ABZR87_RS07700 0.78 +1.2 1,634,320 - +1.7 1,634,407 - +0.4 1,634,427 + +0.8 1,634,427 + -0.5 1,634,427 + +0.3 1,634,427 + -0.7 1,634,427 + +0.6 1,634,427 + +0.1 1,634,427 + +0.5 1,634,427 + -0.3 1,634,428 - +0.5 1,634,483 - +0.1 1,634,712 + ABZR87_RS07705 0.19 -1.7 1,634,789 - ABZR87_RS07705 0.27 -0.9 1,635,144 + ABZR87_RS07705 0.62 +0.4 1,635,144 + ABZR87_RS07705 0.62 +0.1 1,635,280 - ABZR87_RS07705 0.75 -0.7 1,635,280 - ABZR87_RS07705 0.75 -0.3 1,635,331 + ABZR87_RS07705 0.80 -1.2 1,635,331 + ABZR87_RS07705 0.80 -1.6 1,635,332 - ABZR87_RS07705 0.80 -0.7 1,635,332 - ABZR87_RS07705 0.80 -0.3 1,635,332 - ABZR87_RS07705 0.80 +1.5 1,635,361 + ABZR87_RS07705 0.83 -0.5 1,635,911 + ABZR87_RS07710 0.41 -0.2 1,635,912 - ABZR87_RS07710 0.41 +0.4 1,635,912 - ABZR87_RS07710 0.41 -0.4 1,635,912 - ABZR87_RS07710 0.41 -0.6 1,635,912 - ABZR87_RS07710 0.41 -0.0 1,635,912 - ABZR87_RS07710 0.41 +0.6 1,635,912 - ABZR87_RS07710 0.41 -0.0 1,636,067 + ABZR87_RS07710 0.59 +0.9 1,636,067 + ABZR87_RS07710 0.59 +0.7 1,636,067 + ABZR87_RS07710 0.59 -0.4 1,636,068 - ABZR87_RS07710 0.59 +0.1 1,636,068 - ABZR87_RS07710 0.59 +0.1 1,636,070 + ABZR87_RS07710 0.60 +0.2 1,636,070 + ABZR87_RS07710 0.60 +0.3 1,636,070 + ABZR87_RS07710 0.60 -1.3 1,636,070 + ABZR87_RS07710 0.60 -1.0 1,636,070 + ABZR87_RS07710 0.60 +1.5 1,636,070 + ABZR87_RS07710 0.60 +0.1 1,636,070 + ABZR87_RS07710 0.60 +0.1 1,636,070 + ABZR87_RS07710 0.60 -0.1 1,636,071 - ABZR87_RS07710 0.60 +0.1 1,636,071 - ABZR87_RS07710 0.60 -0.3 1,636,071 - ABZR87_RS07710 0.60 +1.0 1,636,249 + ABZR87_RS07710 0.81 -0.0 1,636,250 - ABZR87_RS07710 0.81 +0.1 1,636,250 - ABZR87_RS07710 0.81 +0.5 1,636,250 - ABZR87_RS07710 0.81 -0.3 1,636,399 + -0.7 1,636,400 - +0.7
Or see this region's nucleotide sequence