Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04860 and ABZR87_RS04865 are separated by 10 nucleotides ABZR87_RS04865 and ABZR87_RS04870 are separated by 29 nucleotides ABZR87_RS04870 and ABZR87_RS04875 are separated by 4 nucleotides ABZR87_RS04875 and ABZR87_RS04880 are separated by 17 nucleotides
ABZR87_RS04860: ABZR87_RS04860 - phage holin family protein, at 1,021,056 to 1,021,400
_RS04860
ABZR87_RS04865: ABZR87_RS04865 - methylenetetrahydrofolate reductase [NAD(P)H], at 1,021,411 to 1,022,241
_RS04865
ABZR87_RS04870: ABZR87_RS04870 - TfoX/Sxy family protein, at 1,022,271 to 1,022,729
_RS04870
ABZR87_RS04875: ABZR87_RS04875 - pyridoxamine 5'-phosphate oxidase family protein, at 1,022,734 to 1,023,348
_RS04875
ABZR87_RS04880: ABZR87_RS04880 - 5-formyltetrahydrofolate cyclo-ligase, at 1,023,366 to 1,023,971
_RS04880
Position (kb)
1022
1023 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1021.350 kb on + strand, within ABZR87_RS04860 at 1021.350 kb on + strand, within ABZR87_RS04860 at 1021.350 kb on + strand, within ABZR87_RS04860 at 1021.351 kb on - strand, within ABZR87_RS04860 at 1021.351 kb on - strand, within ABZR87_RS04860 at 1021.351 kb on - strand, within ABZR87_RS04860 at 1021.398 kb on + strand at 1021.398 kb on + strand at 1021.398 kb on + strand at 1021.398 kb on + strand at 1021.399 kb on - strand at 1021.399 kb on - strand at 1021.662 kb on + strand, within ABZR87_RS04865 at 1021.662 kb on + strand, within ABZR87_RS04865 at 1021.662 kb on + strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.663 kb on - strand, within ABZR87_RS04865 at 1021.666 kb on + strand, within ABZR87_RS04865 at 1021.825 kb on + strand, within ABZR87_RS04865 at 1021.826 kb on - strand, within ABZR87_RS04865 at 1021.912 kb on + strand, within ABZR87_RS04865 at 1021.912 kb on + strand, within ABZR87_RS04865 at 1021.912 kb on + strand, within ABZR87_RS04865 at 1021.913 kb on - strand, within ABZR87_RS04865 at 1021.913 kb on - strand, within ABZR87_RS04865 at 1021.933 kb on + strand, within ABZR87_RS04865 at 1022.185 kb on + strand at 1022.186 kb on - strand at 1022.186 kb on - strand at 1022.239 kb on + strand at 1022.382 kb on + strand, within ABZR87_RS04870 at 1022.382 kb on + strand, within ABZR87_RS04870 at 1022.386 kb on - strand, within ABZR87_RS04870 at 1022.386 kb on - strand, within ABZR87_RS04870 at 1022.427 kb on + strand, within ABZR87_RS04870 at 1022.427 kb on + strand, within ABZR87_RS04870 at 1022.427 kb on + strand, within ABZR87_RS04870 at 1022.427 kb on + strand, within ABZR87_RS04870 at 1022.427 kb on + strand, within ABZR87_RS04870 at 1022.427 kb on + strand, within ABZR87_RS04870 at 1022.428 kb on - strand, within ABZR87_RS04870 at 1022.428 kb on - strand, within ABZR87_RS04870 at 1022.428 kb on - strand, within ABZR87_RS04870 at 1022.491 kb on - strand, within ABZR87_RS04870 at 1022.491 kb on - strand, within ABZR87_RS04870 at 1022.491 kb on - strand, within ABZR87_RS04870 at 1022.526 kb on + strand, within ABZR87_RS04870 at 1022.527 kb on - strand, within ABZR87_RS04870 at 1022.527 kb on - strand, within ABZR87_RS04870 at 1022.527 kb on - strand, within ABZR87_RS04870 at 1022.527 kb on - strand, within ABZR87_RS04870 at 1022.666 kb on + strand, within ABZR87_RS04870 at 1022.666 kb on + strand, within ABZR87_RS04870 at 1022.667 kb on - strand, within ABZR87_RS04870 at 1022.667 kb on - strand, within ABZR87_RS04870 at 1022.738 kb on + strand at 1022.738 kb on + strand at 1022.739 kb on - strand at 1022.739 kb on - strand at 1022.777 kb on + strand at 1022.777 kb on + strand at 1022.777 kb on + strand at 1022.778 kb on - strand at 1022.796 kb on + strand, within ABZR87_RS04875 at 1022.797 kb on - strand, within ABZR87_RS04875 at 1022.797 kb on - strand, within ABZR87_RS04875 at 1022.797 kb on - strand, within ABZR87_RS04875 at 1022.797 kb on - strand, within ABZR87_RS04875 at 1022.797 kb on - strand, within ABZR87_RS04875 at 1022.909 kb on + strand, within ABZR87_RS04875 at 1022.909 kb on + strand, within ABZR87_RS04875 at 1022.910 kb on - strand, within ABZR87_RS04875 at 1022.910 kb on - strand, within ABZR87_RS04875 at 1022.910 kb on - strand, within ABZR87_RS04875 at 1022.927 kb on - strand, within ABZR87_RS04875 at 1023.078 kb on + strand, within ABZR87_RS04875 at 1023.079 kb on - strand, within ABZR87_RS04875 at 1023.306 kb on - strand at 1023.306 kb on - strand at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.451 kb on + strand, within ABZR87_RS04880 at 1023.452 kb on - strand, within ABZR87_RS04880 at 1023.452 kb on - strand, within ABZR87_RS04880 at 1023.452 kb on - strand, within ABZR87_RS04880 at 1023.452 kb on - strand, within ABZR87_RS04880 at 1023.452 kb on - strand, within ABZR87_RS04880 at 1023.452 kb on - strand, within ABZR87_RS04880 at 1023.514 kb on + strand, within ABZR87_RS04880 at 1023.514 kb on + strand, within ABZR87_RS04880 at 1023.515 kb on - strand, within ABZR87_RS04880 at 1023.515 kb on - strand, within ABZR87_RS04880 at 1023.515 kb on - strand, within ABZR87_RS04880 at 1023.515 kb on - strand, within ABZR87_RS04880 at 1023.529 kb on + strand, within ABZR87_RS04880 at 1023.625 kb on + strand, within ABZR87_RS04880 at 1023.625 kb on + strand, within ABZR87_RS04880 at 1023.626 kb on - strand, within ABZR87_RS04880 at 1023.626 kb on - strand, within ABZR87_RS04880 at 1023.626 kb on - strand, within ABZR87_RS04880 at 1023.626 kb on - strand, within ABZR87_RS04880 at 1023.696 kb on + strand, within ABZR87_RS04880 at 1023.697 kb on - strand, within ABZR87_RS04880 at 1023.697 kb on - strand, within ABZR87_RS04880
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,021,350 + ABZR87_RS04860 0.85 +0.6 1,021,350 + ABZR87_RS04860 0.85 -0.4 1,021,350 + ABZR87_RS04860 0.85 -0.0 1,021,351 - ABZR87_RS04860 0.86 +0.2 1,021,351 - ABZR87_RS04860 0.86 +0.5 1,021,351 - ABZR87_RS04860 0.86 -0.5 1,021,398 + -0.5 1,021,398 + +0.4 1,021,398 + -0.0 1,021,398 + +0.9 1,021,399 - -0.4 1,021,399 - -3.0 1,021,662 + ABZR87_RS04865 0.30 -3.3 1,021,662 + ABZR87_RS04865 0.30 -1.2 1,021,662 + ABZR87_RS04865 0.30 -0.9 1,021,663 - ABZR87_RS04865 0.30 -2.5 1,021,663 - ABZR87_RS04865 0.30 -2.4 1,021,663 - ABZR87_RS04865 0.30 -1.8 1,021,663 - ABZR87_RS04865 0.30 -1.7 1,021,663 - ABZR87_RS04865 0.30 -2.2 1,021,663 - ABZR87_RS04865 0.30 -1.4 1,021,663 - ABZR87_RS04865 0.30 -1.7 1,021,663 - ABZR87_RS04865 0.30 -1.8 1,021,663 - ABZR87_RS04865 0.30 -0.7 1,021,663 - ABZR87_RS04865 0.30 -1.8 1,021,666 + ABZR87_RS04865 0.31 -2.5 1,021,825 + ABZR87_RS04865 0.50 -1.6 1,021,826 - ABZR87_RS04865 0.50 +0.2 1,021,912 + ABZR87_RS04865 0.60 -2.2 1,021,912 + ABZR87_RS04865 0.60 -1.6 1,021,912 + ABZR87_RS04865 0.60 -2.2 1,021,913 - ABZR87_RS04865 0.60 -2.3 1,021,913 - ABZR87_RS04865 0.60 -1.7 1,021,933 + ABZR87_RS04865 0.63 -2.2 1,022,185 + -1.0 1,022,186 - -1.8 1,022,186 - -1.5 1,022,239 + -0.4 1,022,382 + ABZR87_RS04870 0.24 +0.3 1,022,382 + ABZR87_RS04870 0.24 -0.6 1,022,386 - ABZR87_RS04870 0.25 -0.1 1,022,386 - ABZR87_RS04870 0.25 -0.3 1,022,427 + ABZR87_RS04870 0.34 -0.6 1,022,427 + ABZR87_RS04870 0.34 -0.3 1,022,427 + ABZR87_RS04870 0.34 -0.1 1,022,427 + ABZR87_RS04870 0.34 +0.0 1,022,427 + ABZR87_RS04870 0.34 -0.1 1,022,427 + ABZR87_RS04870 0.34 +0.4 1,022,428 - ABZR87_RS04870 0.34 +0.9 1,022,428 - ABZR87_RS04870 0.34 +0.2 1,022,428 - ABZR87_RS04870 0.34 -0.6 1,022,491 - ABZR87_RS04870 0.48 +0.0 1,022,491 - ABZR87_RS04870 0.48 +1.0 1,022,491 - ABZR87_RS04870 0.48 +0.3 1,022,526 + ABZR87_RS04870 0.56 +0.3 1,022,527 - ABZR87_RS04870 0.56 +0.4 1,022,527 - ABZR87_RS04870 0.56 +0.1 1,022,527 - ABZR87_RS04870 0.56 -0.4 1,022,527 - ABZR87_RS04870 0.56 +0.7 1,022,666 + ABZR87_RS04870 0.86 -1.4 1,022,666 + ABZR87_RS04870 0.86 -0.5 1,022,667 - ABZR87_RS04870 0.86 +0.4 1,022,667 - ABZR87_RS04870 0.86 +0.1 1,022,738 + +0.5 1,022,738 + -0.4 1,022,739 - +0.2 1,022,739 - -0.9 1,022,777 + -0.4 1,022,777 + -0.8 1,022,777 + -0.2 1,022,778 - +0.7 1,022,796 + ABZR87_RS04875 0.10 -0.7 1,022,797 - ABZR87_RS04875 0.10 -0.9 1,022,797 - ABZR87_RS04875 0.10 +0.0 1,022,797 - ABZR87_RS04875 0.10 -0.6 1,022,797 - ABZR87_RS04875 0.10 +0.6 1,022,797 - ABZR87_RS04875 0.10 -0.3 1,022,909 + ABZR87_RS04875 0.28 -0.6 1,022,909 + ABZR87_RS04875 0.28 -0.0 1,022,910 - ABZR87_RS04875 0.29 +0.1 1,022,910 - ABZR87_RS04875 0.29 +0.6 1,022,910 - ABZR87_RS04875 0.29 +0.2 1,022,927 - ABZR87_RS04875 0.31 +0.1 1,023,078 + ABZR87_RS04875 0.56 +1.0 1,023,079 - ABZR87_RS04875 0.56 -0.2 1,023,306 - -0.2 1,023,306 - +0.8 1,023,451 + ABZR87_RS04880 0.14 +0.2 1,023,451 + ABZR87_RS04880 0.14 +0.4 1,023,451 + ABZR87_RS04880 0.14 +0.3 1,023,451 + ABZR87_RS04880 0.14 -0.5 1,023,451 + ABZR87_RS04880 0.14 +1.1 1,023,451 + ABZR87_RS04880 0.14 -0.6 1,023,451 + ABZR87_RS04880 0.14 -0.8 1,023,451 + ABZR87_RS04880 0.14 +0.1 1,023,452 - ABZR87_RS04880 0.14 +0.1 1,023,452 - ABZR87_RS04880 0.14 -0.4 1,023,452 - ABZR87_RS04880 0.14 -0.1 1,023,452 - ABZR87_RS04880 0.14 -0.4 1,023,452 - ABZR87_RS04880 0.14 +0.0 1,023,452 - ABZR87_RS04880 0.14 +0.2 1,023,514 + ABZR87_RS04880 0.24 -0.2 1,023,514 + ABZR87_RS04880 0.24 -0.2 1,023,515 - ABZR87_RS04880 0.25 -0.5 1,023,515 - ABZR87_RS04880 0.25 -0.8 1,023,515 - ABZR87_RS04880 0.25 +0.0 1,023,515 - ABZR87_RS04880 0.25 -0.1 1,023,529 + ABZR87_RS04880 0.27 +1.1 1,023,625 + ABZR87_RS04880 0.43 -0.8 1,023,625 + ABZR87_RS04880 0.43 +0.2 1,023,626 - ABZR87_RS04880 0.43 +0.4 1,023,626 - ABZR87_RS04880 0.43 +0.3 1,023,626 - ABZR87_RS04880 0.43 +0.1 1,023,626 - ABZR87_RS04880 0.43 -0.5 1,023,696 + ABZR87_RS04880 0.54 -0.9 1,023,697 - ABZR87_RS04880 0.55 -0.8 1,023,697 - ABZR87_RS04880 0.55 -0.4
Or see this region's nucleotide sequence