Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01525 and ABZR87_RS01530 are separated by 25 nucleotides ABZR87_RS01530 and ABZR87_RS01535 are separated by 2 nucleotides ABZR87_RS01535 and ABZR87_RS01540 are separated by 53 nucleotides
ABZR87_RS01525: ABZR87_RS01525 - MFS transporter, at 320,749 to 322,074
_RS01525
ABZR87_RS01530: ABZR87_RS01530 - dihydrodipicolinate synthase family protein, at 322,100 to 323,029
_RS01530
ABZR87_RS01535: ABZR87_RS01535 - Gfo/Idh/MocA family oxidoreductase, at 323,032 to 323,970
_RS01535
ABZR87_RS01540: ABZR87_RS01540 - arabinose ABC transporter substrate-binding protein, at 324,024 to 325,028
_RS01540
Position (kb) 323
324 Strain fitness (log2 ratio) -1
0
1
2
3 at 322.358 kb on + strand, within ABZR87_RS01530 at 322.358 kb on + strand, within ABZR87_RS01530 at 322.358 kb on + strand, within ABZR87_RS01530 at 322.359 kb on - strand, within ABZR87_RS01530 at 322.475 kb on + strand, within ABZR87_RS01530 at 322.476 kb on - strand, within ABZR87_RS01530 at 322.511 kb on - strand, within ABZR87_RS01530 at 322.604 kb on + strand, within ABZR87_RS01530 at 322.760 kb on + strand, within ABZR87_RS01530 at 322.829 kb on + strand, within ABZR87_RS01530 at 322.829 kb on + strand, within ABZR87_RS01530 at 322.830 kb on - strand, within ABZR87_RS01530 at 322.830 kb on - strand, within ABZR87_RS01530 at 323.182 kb on + strand, within ABZR87_RS01535 at 323.182 kb on + strand, within ABZR87_RS01535 at 323.183 kb on - strand, within ABZR87_RS01535 at 323.183 kb on - strand, within ABZR87_RS01535 at 323.183 kb on - strand, within ABZR87_RS01535 at 323.376 kb on + strand, within ABZR87_RS01535 at 323.376 kb on + strand, within ABZR87_RS01535 at 323.376 kb on + strand, within ABZR87_RS01535 at 323.376 kb on + strand, within ABZR87_RS01535 at 323.376 kb on + strand, within ABZR87_RS01535 at 323.376 kb on + strand, within ABZR87_RS01535 at 323.377 kb on - strand, within ABZR87_RS01535 at 323.377 kb on - strand, within ABZR87_RS01535 at 323.377 kb on - strand, within ABZR87_RS01535 at 323.377 kb on - strand, within ABZR87_RS01535 at 323.848 kb on + strand, within ABZR87_RS01535 at 323.849 kb on - strand, within ABZR87_RS01535 at 323.984 kb on + strand at 323.984 kb on + strand at 323.984 kb on + strand at 323.984 kb on + strand at 323.985 kb on - strand at 323.985 kb on - strand at 323.985 kb on - strand at 323.985 kb on - strand at 323.985 kb on - strand at 323.985 kb on - strand at 323.988 kb on + strand at 323.989 kb on - strand at 323.989 kb on - strand at 323.989 kb on - strand at 323.989 kb on - strand at 323.989 kb on - strand at 324.357 kb on + strand, within ABZR87_RS01540 at 324.357 kb on + strand, within ABZR87_RS01540 at 324.357 kb on + strand, within ABZR87_RS01540 at 324.357 kb on + strand, within ABZR87_RS01540 at 324.358 kb on - strand, within ABZR87_RS01540 at 324.358 kb on - strand, within ABZR87_RS01540 at 324.358 kb on - strand, within ABZR87_RS01540 at 324.358 kb on - strand, within ABZR87_RS01540 at 324.544 kb on - strand, within ABZR87_RS01540
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 322,358 + ABZR87_RS01530 0.28 +1.5 322,358 + ABZR87_RS01530 0.28 +1.2 322,358 + ABZR87_RS01530 0.28 +1.0 322,359 - ABZR87_RS01530 0.28 +0.9 322,475 + ABZR87_RS01530 0.40 +0.9 322,476 - ABZR87_RS01530 0.40 +2.1 322,511 - ABZR87_RS01530 0.44 +0.3 322,604 + ABZR87_RS01530 0.54 +0.9 322,760 + ABZR87_RS01530 0.71 +0.9 322,829 + ABZR87_RS01530 0.78 +1.3 322,829 + ABZR87_RS01530 0.78 +1.1 322,830 - ABZR87_RS01530 0.78 +1.2 322,830 - ABZR87_RS01530 0.78 +0.4 323,182 + ABZR87_RS01535 0.16 +1.7 323,182 + ABZR87_RS01535 0.16 +0.9 323,183 - ABZR87_RS01535 0.16 +0.2 323,183 - ABZR87_RS01535 0.16 +1.2 323,183 - ABZR87_RS01535 0.16 +0.7 323,376 + ABZR87_RS01535 0.37 +1.0 323,376 + ABZR87_RS01535 0.37 +1.2 323,376 + ABZR87_RS01535 0.37 +1.2 323,376 + ABZR87_RS01535 0.37 +1.6 323,376 + ABZR87_RS01535 0.37 +1.1 323,376 + ABZR87_RS01535 0.37 +1.0 323,377 - ABZR87_RS01535 0.37 +1.4 323,377 - ABZR87_RS01535 0.37 +0.4 323,377 - ABZR87_RS01535 0.37 +1.5 323,377 - ABZR87_RS01535 0.37 +1.7 323,848 + ABZR87_RS01535 0.87 +1.2 323,849 - ABZR87_RS01535 0.87 +1.2 323,984 + +0.8 323,984 + +0.7 323,984 + +1.2 323,984 + +0.8 323,985 - +1.2 323,985 - +1.4 323,985 - +0.5 323,985 - +1.1 323,985 - +0.6 323,985 - +0.8 323,988 + -0.0 323,989 - +1.6 323,989 - +0.6 323,989 - +3.2 323,989 - +1.2 323,989 - +1.2 324,357 + ABZR87_RS01540 0.33 +1.3 324,357 + ABZR87_RS01540 0.33 +1.4 324,357 + ABZR87_RS01540 0.33 +1.6 324,357 + ABZR87_RS01540 0.33 +1.4 324,358 - ABZR87_RS01540 0.33 +0.9 324,358 - ABZR87_RS01540 0.33 +1.5 324,358 - ABZR87_RS01540 0.33 +1.3 324,358 - ABZR87_RS01540 0.33 +1.1 324,544 - ABZR87_RS01540 0.52 +0.9
Or see this region's nucleotide sequence