Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01490 and ABZR87_RS01495 are separated by 175 nucleotides ABZR87_RS01495 and ABZR87_RS01500 are separated by 77 nucleotides ABZR87_RS01500 and ABZR87_RS01505 are separated by 49 nucleotides
ABZR87_RS01490: ABZR87_RS01490 - porin, at 313,637 to 314,713
_RS01490
ABZR87_RS01495: ABZR87_RS01495 - transcriptional regulator GcvA, at 314,889 to 315,815
_RS01495
ABZR87_RS01500: ABZR87_RS01500 - glyoxalase/bleomycin resistance/extradiol dioxygenase family protein, at 315,893 to 316,312
_RS01500
ABZR87_RS01505: ABZR87_RS01505 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 316,362 to 317,111
_RS01505
Position (kb)
314
315
316 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 313.965 kb on - strand, within ABZR87_RS01490 at 314.604 kb on + strand, within ABZR87_RS01490 at 314.604 kb on + strand, within ABZR87_RS01490 at 314.604 kb on + strand, within ABZR87_RS01490 at 314.737 kb on - strand at 314.737 kb on - strand at 314.817 kb on + strand at 314.817 kb on + strand at 314.818 kb on - strand at 314.913 kb on - strand at 314.913 kb on - strand at 315.093 kb on + strand, within ABZR87_RS01495 at 315.093 kb on + strand, within ABZR87_RS01495 at 315.093 kb on + strand, within ABZR87_RS01495 at 315.093 kb on + strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.226 kb on - strand, within ABZR87_RS01495 at 315.520 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.622 kb on - strand, within ABZR87_RS01495 at 315.622 kb on - strand, within ABZR87_RS01495 at 315.622 kb on - strand, within ABZR87_RS01495 at 315.684 kb on + strand, within ABZR87_RS01495 at 315.684 kb on + strand, within ABZR87_RS01495 at 315.685 kb on - strand, within ABZR87_RS01495 at 315.688 kb on - strand, within ABZR87_RS01495 at 315.688 kb on - strand, within ABZR87_RS01495 at 315.847 kb on + strand at 315.848 kb on - strand at 315.848 kb on - strand at 315.848 kb on - strand at 315.852 kb on + strand at 315.852 kb on + strand at 315.852 kb on + strand at 315.852 kb on + strand at 315.852 kb on + strand at 315.853 kb on - strand at 315.853 kb on - strand at 315.853 kb on - strand at 315.853 kb on - strand at 315.853 kb on - strand at 315.974 kb on + strand, within ABZR87_RS01500 at 315.974 kb on + strand, within ABZR87_RS01500 at 315.975 kb on - strand, within ABZR87_RS01500 at 315.975 kb on - strand, within ABZR87_RS01500 at 316.049 kb on + strand, within ABZR87_RS01500 at 316.049 kb on + strand, within ABZR87_RS01500 at 316.049 kb on + strand, within ABZR87_RS01500 at 316.050 kb on - strand, within ABZR87_RS01500 at 316.155 kb on - strand, within ABZR87_RS01500 at 316.155 kb on - strand, within ABZR87_RS01500 at 316.155 kb on - strand, within ABZR87_RS01500 at 316.178 kb on + strand, within ABZR87_RS01500 at 316.179 kb on - strand, within ABZR87_RS01500 at 316.179 kb on - strand, within ABZR87_RS01500 at 316.274 kb on + strand at 316.360 kb on + strand at 316.361 kb on - strand at 316.669 kb on + strand, within ABZR87_RS01505 at 316.669 kb on + strand, within ABZR87_RS01505 at 316.669 kb on + strand, within ABZR87_RS01505 at 316.669 kb on + strand, within ABZR87_RS01505 at 316.669 kb on + strand, within ABZR87_RS01505 at 316.670 kb on - strand, within ABZR87_RS01505
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 313,965 - ABZR87_RS01490 0.30 -4.1 314,604 + ABZR87_RS01490 0.90 -3.9 314,604 + ABZR87_RS01490 0.90 -2.4 314,604 + ABZR87_RS01490 0.90 -4.0 314,737 - -1.1 314,737 - -1.6 314,817 + -2.1 314,817 + -2.3 314,818 - -3.3 314,913 - -2.5 314,913 - -2.6 315,093 + ABZR87_RS01495 0.22 -2.5 315,093 + ABZR87_RS01495 0.22 -2.8 315,093 + ABZR87_RS01495 0.22 -4.3 315,093 + ABZR87_RS01495 0.22 -3.1 315,094 - ABZR87_RS01495 0.22 -3.8 315,094 - ABZR87_RS01495 0.22 -3.9 315,094 - ABZR87_RS01495 0.22 -3.5 315,094 - ABZR87_RS01495 0.22 -4.2 315,094 - ABZR87_RS01495 0.22 -2.4 315,094 - ABZR87_RS01495 0.22 -3.2 315,094 - ABZR87_RS01495 0.22 -3.7 315,094 - ABZR87_RS01495 0.22 -3.7 315,094 - ABZR87_RS01495 0.22 -2.2 315,226 - ABZR87_RS01495 0.36 -3.2 315,520 + ABZR87_RS01495 0.68 -2.6 315,621 + ABZR87_RS01495 0.79 -4.0 315,621 + ABZR87_RS01495 0.79 -3.7 315,621 + ABZR87_RS01495 0.79 -2.4 315,621 + ABZR87_RS01495 0.79 -2.6 315,622 - ABZR87_RS01495 0.79 -3.7 315,622 - ABZR87_RS01495 0.79 -3.9 315,622 - ABZR87_RS01495 0.79 -3.8 315,684 + ABZR87_RS01495 0.86 -4.1 315,684 + ABZR87_RS01495 0.86 -3.2 315,685 - ABZR87_RS01495 0.86 -2.6 315,688 - ABZR87_RS01495 0.86 -2.7 315,688 - ABZR87_RS01495 0.86 -3.1 315,847 + +1.4 315,848 - -0.4 315,848 - -0.9 315,848 - -0.7 315,852 + +0.8 315,852 + +1.0 315,852 + +0.4 315,852 + +0.4 315,852 + +0.6 315,853 - -1.0 315,853 - -0.9 315,853 - -0.8 315,853 - -0.1 315,853 - -1.0 315,974 + ABZR87_RS01500 0.19 +0.8 315,974 + ABZR87_RS01500 0.19 +0.5 315,975 - ABZR87_RS01500 0.20 -0.2 315,975 - ABZR87_RS01500 0.20 -1.2 316,049 + ABZR87_RS01500 0.37 +0.5 316,049 + ABZR87_RS01500 0.37 -0.1 316,049 + ABZR87_RS01500 0.37 -0.4 316,050 - ABZR87_RS01500 0.37 -0.9 316,155 - ABZR87_RS01500 0.62 -0.4 316,155 - ABZR87_RS01500 0.62 -1.7 316,155 - ABZR87_RS01500 0.62 -0.3 316,178 + ABZR87_RS01500 0.68 +0.0 316,179 - ABZR87_RS01500 0.68 -0.5 316,179 - ABZR87_RS01500 0.68 -0.1 316,274 + +0.9 316,360 + -0.6 316,361 - -0.8 316,669 + ABZR87_RS01505 0.41 +0.6 316,669 + ABZR87_RS01505 0.41 +0.2 316,669 + ABZR87_RS01505 0.41 -0.8 316,669 + ABZR87_RS01505 0.41 +1.8 316,669 + ABZR87_RS01505 0.41 -0.3 316,670 - ABZR87_RS01505 0.41 -2.3
Or see this region's nucleotide sequence