Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01485 and ABZR87_RS01490 are separated by 173 nucleotides ABZR87_RS01490 and ABZR87_RS01495 are separated by 175 nucleotides
ABZR87_RS01485: ABZR87_RS01485 - 2-dehydro-3-deoxygalactonokinase, at 312,450 to 313,463
_RS01485
ABZR87_RS01490: ABZR87_RS01490 - porin, at 313,637 to 314,713
_RS01490
ABZR87_RS01495: ABZR87_RS01495 - transcriptional regulator GcvA, at 314,889 to 315,815
_RS01495
Position (kb) 313
314
315 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 312.733 kb on + strand, within ABZR87_RS01485 at 312.733 kb on + strand, within ABZR87_RS01485 at 312.733 kb on + strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485 at 313.437 kb on - strand at 313.505 kb on - strand at 313.639 kb on - strand at 313.661 kb on - strand at 313.663 kb on - strand at 313.663 kb on - strand at 313.663 kb on - strand at 313.663 kb on - strand at 313.762 kb on - strand, within ABZR87_RS01490 at 313.965 kb on - strand, within ABZR87_RS01490 at 314.604 kb on + strand, within ABZR87_RS01490 at 314.604 kb on + strand, within ABZR87_RS01490 at 314.604 kb on + strand, within ABZR87_RS01490 at 314.737 kb on - strand at 314.737 kb on - strand at 314.817 kb on + strand at 314.817 kb on + strand at 314.818 kb on - strand at 314.913 kb on - strand at 314.913 kb on - strand at 315.093 kb on + strand, within ABZR87_RS01495 at 315.093 kb on + strand, within ABZR87_RS01495 at 315.093 kb on + strand, within ABZR87_RS01495 at 315.093 kb on + strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.094 kb on - strand, within ABZR87_RS01495 at 315.226 kb on - strand, within ABZR87_RS01495 at 315.520 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.621 kb on + strand, within ABZR87_RS01495 at 315.622 kb on - strand, within ABZR87_RS01495 at 315.622 kb on - strand, within ABZR87_RS01495 at 315.622 kb on - strand, within ABZR87_RS01495 at 315.684 kb on + strand, within ABZR87_RS01495 at 315.684 kb on + strand, within ABZR87_RS01495 at 315.685 kb on - strand, within ABZR87_RS01495 at 315.688 kb on - strand, within ABZR87_RS01495 at 315.688 kb on - strand, within ABZR87_RS01495
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 312,733 + ABZR87_RS01485 0.28 -3.5 312,733 + ABZR87_RS01485 0.28 -1.5 312,733 + ABZR87_RS01485 0.28 -3.3 312,734 - ABZR87_RS01485 0.28 -2.1 312,734 - ABZR87_RS01485 0.28 -4.0 312,734 - ABZR87_RS01485 0.28 -1.4 312,734 - ABZR87_RS01485 0.28 -2.4 313,437 - -3.1 313,505 - +0.3 313,639 - -2.5 313,661 - -1.0 313,663 - -3.5 313,663 - -3.2 313,663 - -3.9 313,663 - -1.5 313,762 - ABZR87_RS01490 0.12 -2.6 313,965 - ABZR87_RS01490 0.30 -4.1 314,604 + ABZR87_RS01490 0.90 -3.9 314,604 + ABZR87_RS01490 0.90 -2.4 314,604 + ABZR87_RS01490 0.90 -4.0 314,737 - -1.1 314,737 - -1.6 314,817 + -2.1 314,817 + -2.3 314,818 - -3.3 314,913 - -2.5 314,913 - -2.6 315,093 + ABZR87_RS01495 0.22 -2.5 315,093 + ABZR87_RS01495 0.22 -2.8 315,093 + ABZR87_RS01495 0.22 -4.3 315,093 + ABZR87_RS01495 0.22 -3.1 315,094 - ABZR87_RS01495 0.22 -3.8 315,094 - ABZR87_RS01495 0.22 -3.9 315,094 - ABZR87_RS01495 0.22 -3.5 315,094 - ABZR87_RS01495 0.22 -4.2 315,094 - ABZR87_RS01495 0.22 -2.4 315,094 - ABZR87_RS01495 0.22 -3.2 315,094 - ABZR87_RS01495 0.22 -3.7 315,094 - ABZR87_RS01495 0.22 -3.7 315,094 - ABZR87_RS01495 0.22 -2.2 315,226 - ABZR87_RS01495 0.36 -3.2 315,520 + ABZR87_RS01495 0.68 -2.6 315,621 + ABZR87_RS01495 0.79 -4.0 315,621 + ABZR87_RS01495 0.79 -3.7 315,621 + ABZR87_RS01495 0.79 -2.4 315,621 + ABZR87_RS01495 0.79 -2.6 315,622 - ABZR87_RS01495 0.79 -3.7 315,622 - ABZR87_RS01495 0.79 -3.9 315,622 - ABZR87_RS01495 0.79 -3.8 315,684 + ABZR87_RS01495 0.86 -4.1 315,684 + ABZR87_RS01495 0.86 -3.2 315,685 - ABZR87_RS01495 0.86 -2.6 315,688 - ABZR87_RS01495 0.86 -2.7 315,688 - ABZR87_RS01495 0.86 -3.1
Or see this region's nucleotide sequence