Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01475 and ABZR87_RS01480 are separated by 33 nucleotides ABZR87_RS01480 and ABZR87_RS01485 are separated by 132 nucleotides
ABZR87_RS01475: ABZR87_RS01475 - L-arabinose ABC transporter ATP-binding protein AraG, at 309,816 to 311,336
_RS01475
ABZR87_RS01480: ABZR87_RS01480 - arabinose ABC transporter substrate-binding protein, at 311,370 to 312,317
_RS01480
ABZR87_RS01485: ABZR87_RS01485 - 2-dehydro-3-deoxygalactonokinase, at 312,450 to 313,463
_RS01485
Position (kb) 311
312
313 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 310.509 kb on + strand, within ABZR87_RS01475 at 310.753 kb on + strand, within ABZR87_RS01475 at 310.753 kb on + strand, within ABZR87_RS01475 at 310.753 kb on + strand, within ABZR87_RS01475 at 310.754 kb on - strand, within ABZR87_RS01475 at 311.176 kb on + strand, within ABZR87_RS01475 at 311.195 kb on + strand at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.476 kb on + strand, within ABZR87_RS01480 at 311.477 kb on - strand, within ABZR87_RS01480 at 311.477 kb on - strand, within ABZR87_RS01480 at 311.556 kb on - strand, within ABZR87_RS01480 at 311.857 kb on + strand, within ABZR87_RS01480 at 311.857 kb on + strand, within ABZR87_RS01480 at 311.858 kb on - strand, within ABZR87_RS01480 at 312.452 kb on - strand at 312.733 kb on + strand, within ABZR87_RS01485 at 312.733 kb on + strand, within ABZR87_RS01485 at 312.733 kb on + strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485 at 312.734 kb on - strand, within ABZR87_RS01485
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 310,509 + ABZR87_RS01475 0.46 -1.7 310,753 + ABZR87_RS01475 0.62 -5.8 310,753 + ABZR87_RS01475 0.62 -1.1 310,753 + ABZR87_RS01475 0.62 -2.8 310,754 - ABZR87_RS01475 0.62 -4.9 311,176 + ABZR87_RS01475 0.89 -4.4 311,195 + -3.7 311,476 + ABZR87_RS01480 0.11 -2.8 311,476 + ABZR87_RS01480 0.11 -3.4 311,476 + ABZR87_RS01480 0.11 -1.0 311,476 + ABZR87_RS01480 0.11 -2.4 311,476 + ABZR87_RS01480 0.11 -4.3 311,476 + ABZR87_RS01480 0.11 +0.3 311,476 + ABZR87_RS01480 0.11 -4.0 311,477 - ABZR87_RS01480 0.11 -2.7 311,477 - ABZR87_RS01480 0.11 -0.4 311,556 - ABZR87_RS01480 0.20 -1.9 311,857 + ABZR87_RS01480 0.51 -4.1 311,857 + ABZR87_RS01480 0.51 -3.8 311,858 - ABZR87_RS01480 0.51 -4.9 312,452 - +0.4 312,733 + ABZR87_RS01485 0.28 -3.5 312,733 + ABZR87_RS01485 0.28 -1.5 312,733 + ABZR87_RS01485 0.28 -3.3 312,734 - ABZR87_RS01485 0.28 -2.1 312,734 - ABZR87_RS01485 0.28 -4.0 312,734 - ABZR87_RS01485 0.28 -1.4 312,734 - ABZR87_RS01485 0.28 -2.4
Or see this region's nucleotide sequence