Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01455 and ABZR87_RS01460 overlap by 4 nucleotides ABZR87_RS01460 and ABZR87_RS01465 overlap by 20 nucleotides ABZR87_RS01465 and ABZR87_RS01470 are separated by 10 nucleotides
ABZR87_RS01455: ABZR87_RS01455 - SDR family oxidoreductase, at 306,198 to 307,004
_RS01455
ABZR87_RS01460: ABZR87_RS01460 - aldose 1-epimerase, at 307,001 to 307,885
_RS01460
ABZR87_RS01465: ABZR87_RS01465 - SMP-30/gluconolactonase/LRE family protein, at 307,866 to 308,780
_RS01465
ABZR87_RS01470: ABZR87_RS01470 - L-arabinose ABC transporter permease AraH, at 308,791 to 309,798
_RS01470
Position (kb) 307
308
309 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 307.032 kb on + strand at 307.033 kb on - strand at 307.164 kb on + strand, within ABZR87_RS01460 at 307.164 kb on + strand, within ABZR87_RS01460 at 307.164 kb on + strand, within ABZR87_RS01460 at 307.165 kb on - strand, within ABZR87_RS01460 at 307.165 kb on - strand, within ABZR87_RS01460 at 307.165 kb on - strand, within ABZR87_RS01460 at 307.165 kb on - strand, within ABZR87_RS01460 at 307.165 kb on - strand, within ABZR87_RS01460 at 307.174 kb on - strand, within ABZR87_RS01460 at 307.174 kb on - strand, within ABZR87_RS01460 at 307.174 kb on - strand, within ABZR87_RS01460 at 307.460 kb on + strand, within ABZR87_RS01460 at 307.500 kb on + strand, within ABZR87_RS01460 at 307.500 kb on + strand, within ABZR87_RS01460 at 307.501 kb on - strand, within ABZR87_RS01460 at 307.624 kb on - strand, within ABZR87_RS01460 at 307.624 kb on - strand, within ABZR87_RS01460 at 307.841 kb on + strand at 307.841 kb on + strand at 307.842 kb on - strand at 307.842 kb on - strand at 307.853 kb on + strand at 307.879 kb on + strand at 307.879 kb on + strand at 307.879 kb on + strand at 307.879 kb on + strand at 307.879 kb on + strand at 307.879 kb on + strand at 307.879 kb on + strand at 307.879 kb on + strand at 307.880 kb on - strand at 307.880 kb on - strand at 307.880 kb on - strand at 307.914 kb on + strand at 308.005 kb on + strand, within ABZR87_RS01465 at 308.005 kb on + strand, within ABZR87_RS01465 at 308.005 kb on + strand, within ABZR87_RS01465 at 308.005 kb on + strand, within ABZR87_RS01465 at 308.006 kb on - strand, within ABZR87_RS01465 at 308.006 kb on - strand, within ABZR87_RS01465 at 308.006 kb on - strand, within ABZR87_RS01465 at 308.006 kb on - strand, within ABZR87_RS01465 at 308.228 kb on + strand, within ABZR87_RS01465 at 308.258 kb on - strand, within ABZR87_RS01465 at 308.288 kb on + strand, within ABZR87_RS01465 at 308.299 kb on + strand, within ABZR87_RS01465 at 308.299 kb on + strand, within ABZR87_RS01465 at 308.299 kb on + strand, within ABZR87_RS01465 at 308.300 kb on - strand, within ABZR87_RS01465 at 308.300 kb on - strand, within ABZR87_RS01465 at 308.300 kb on - strand, within ABZR87_RS01465 at 308.300 kb on - strand, within ABZR87_RS01465 at 308.300 kb on - strand, within ABZR87_RS01465 at 308.300 kb on - strand, within ABZR87_RS01465 at 308.395 kb on + strand, within ABZR87_RS01465 at 308.395 kb on + strand, within ABZR87_RS01465 at 308.396 kb on - strand, within ABZR87_RS01465 at 308.396 kb on - strand, within ABZR87_RS01465 at 308.446 kb on + strand, within ABZR87_RS01465 at 308.446 kb on + strand, within ABZR87_RS01465 at 308.446 kb on + strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.447 kb on - strand, within ABZR87_RS01465 at 308.870 kb on + strand at 308.870 kb on + strand at 308.870 kb on + strand at 308.870 kb on + strand at 308.871 kb on - strand at 308.871 kb on - strand at 308.871 kb on - strand at 309.177 kb on + strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.178 kb on - strand, within ABZR87_RS01470 at 309.188 kb on + strand, within ABZR87_RS01470 at 309.644 kb on + strand, within ABZR87_RS01470 at 309.645 kb on - strand, within ABZR87_RS01470
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 307,032 + -3.5 307,033 - -0.1 307,164 + ABZR87_RS01460 0.18 -4.1 307,164 + ABZR87_RS01460 0.18 -3.8 307,164 + ABZR87_RS01460 0.18 -1.8 307,165 - ABZR87_RS01460 0.19 +0.9 307,165 - ABZR87_RS01460 0.19 +0.9 307,165 - ABZR87_RS01460 0.19 +0.7 307,165 - ABZR87_RS01460 0.19 +0.1 307,165 - ABZR87_RS01460 0.19 -0.9 307,174 - ABZR87_RS01460 0.20 +1.0 307,174 - ABZR87_RS01460 0.20 +0.5 307,174 - ABZR87_RS01460 0.20 +1.0 307,460 + ABZR87_RS01460 0.52 -0.2 307,500 + ABZR87_RS01460 0.56 -2.2 307,500 + ABZR87_RS01460 0.56 -1.8 307,501 - ABZR87_RS01460 0.56 +0.4 307,624 - ABZR87_RS01460 0.70 -3.2 307,624 - ABZR87_RS01460 0.70 -2.5 307,841 + -3.9 307,841 + -1.8 307,842 - -2.3 307,842 - -1.2 307,853 + -3.8 307,879 + -0.9 307,879 + -3.2 307,879 + -2.5 307,879 + -5.0 307,879 + -4.7 307,879 + -3.0 307,879 + -3.0 307,879 + -3.8 307,880 - -2.3 307,880 - -2.8 307,880 - -0.8 307,914 + -2.7 308,005 + ABZR87_RS01465 0.15 -3.4 308,005 + ABZR87_RS01465 0.15 -4.1 308,005 + ABZR87_RS01465 0.15 +0.6 308,005 + ABZR87_RS01465 0.15 -1.5 308,006 - ABZR87_RS01465 0.15 -1.7 308,006 - ABZR87_RS01465 0.15 -1.7 308,006 - ABZR87_RS01465 0.15 -2.1 308,006 - ABZR87_RS01465 0.15 -1.5 308,228 + ABZR87_RS01465 0.40 -3.5 308,258 - ABZR87_RS01465 0.43 -3.0 308,288 + ABZR87_RS01465 0.46 -3.0 308,299 + ABZR87_RS01465 0.47 -4.5 308,299 + ABZR87_RS01465 0.47 -4.4 308,299 + ABZR87_RS01465 0.47 -4.1 308,300 - ABZR87_RS01465 0.47 -1.8 308,300 - ABZR87_RS01465 0.47 -2.7 308,300 - ABZR87_RS01465 0.47 -3.3 308,300 - ABZR87_RS01465 0.47 -4.4 308,300 - ABZR87_RS01465 0.47 -2.7 308,300 - ABZR87_RS01465 0.47 -2.9 308,395 + ABZR87_RS01465 0.58 -4.9 308,395 + ABZR87_RS01465 0.58 -3.3 308,396 - ABZR87_RS01465 0.58 -2.3 308,396 - ABZR87_RS01465 0.58 -1.9 308,446 + ABZR87_RS01465 0.63 -4.4 308,446 + ABZR87_RS01465 0.63 -3.5 308,446 + ABZR87_RS01465 0.63 -3.8 308,447 - ABZR87_RS01465 0.63 -4.1 308,447 - ABZR87_RS01465 0.63 +0.1 308,447 - ABZR87_RS01465 0.63 -4.2 308,447 - ABZR87_RS01465 0.63 -3.2 308,447 - ABZR87_RS01465 0.63 -2.1 308,447 - ABZR87_RS01465 0.63 -1.1 308,447 - ABZR87_RS01465 0.63 -3.0 308,447 - ABZR87_RS01465 0.63 -1.8 308,870 + -2.4 308,870 + -0.7 308,870 + -3.3 308,870 + -2.7 308,871 - -2.5 308,871 - -4.1 308,871 - -3.3 309,177 + ABZR87_RS01470 0.38 -2.8 309,178 - ABZR87_RS01470 0.38 -4.0 309,178 - ABZR87_RS01470 0.38 -2.4 309,178 - ABZR87_RS01470 0.38 -1.2 309,178 - ABZR87_RS01470 0.38 -2.4 309,188 + ABZR87_RS01470 0.39 -4.5 309,644 + ABZR87_RS01470 0.85 -3.1 309,645 - ABZR87_RS01470 0.85 -1.4
Or see this region's nucleotide sequence