Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4139
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,970,609 | - | Shewana3_4138 | 0.13 | +0.6 | |
4,970,617 | + | Shewana3_4138 | 0.14 | -1.9 | |
4,970,625 | - | Shewana3_4138 | 0.15 | +0.4 | |
4,970,720 | - | Shewana3_4138 | 0.26 | -0.2 | |
4,970,789 | + | Shewana3_4138 | 0.34 | -1.4 | |
4,970,797 | - | Shewana3_4138 | 0.35 | +0.3 | |
4,970,822 | - | Shewana3_4138 | 0.38 | +0.3 | |
4,970,828 | - | Shewana3_4138 | 0.38 | +2.1 | |
4,971,339 | - | -0.1 | |||
4,971,352 | - | -0.7 | |||
4,971,395 | - | +0.1 | |||
4,971,518 | - | Shewana3_4139 | 0.17 | -0.0 | |
4,971,607 | + | Shewana3_4139 | 0.29 | +2.6 | |
4,971,691 | + | Shewana3_4139 | 0.39 | -0.2 | |
4,971,714 | - | Shewana3_4139 | 0.42 | -0.2 | |
4,972,028 | - | Shewana3_4139 | 0.82 | +0.4 | |
4,972,178 | - | -1.3 | |||
4,972,178 | - | +0.3 |
Or see this region's nucleotide sequence