Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3603 and Shewana3_3604 are separated by 24 nucleotides
Shewana3_3603: Shewana3_3603 - TonB family protein (RefSeq), at 4,326,613 to 4,327,728
_3603
Shewana3_3604: Shewana3_3604 - hypothetical protein (RefSeq), at 4,327,753 to 4,328,112
_3604
Position (kb)
4327
4328
4329 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4327.141 kb on - strand, within Shewana3_3603 at 4327.150 kb on + strand, within Shewana3_3603 at 4327.164 kb on - strand, within Shewana3_3603 at 4327.213 kb on + strand, within Shewana3_3603 at 4327.218 kb on + strand, within Shewana3_3603 at 4327.221 kb on - strand, within Shewana3_3603 at 4327.223 kb on + strand, within Shewana3_3603 at 4327.494 kb on + strand, within Shewana3_3603 at 4327.500 kb on + strand, within Shewana3_3603 at 4327.508 kb on - strand, within Shewana3_3603 at 4327.508 kb on - strand, within Shewana3_3603 at 4327.676 kb on - strand at 4327.824 kb on - strand, within Shewana3_3604 at 4327.874 kb on + strand, within Shewana3_3604 at 4328.112 kb on + strand at 4328.127 kb on - strand at 4328.193 kb on + strand at 4328.200 kb on - strand at 4328.208 kb on - strand at 4328.265 kb on - strand at 4328.319 kb on + strand at 4328.410 kb on - strand at 4328.567 kb on + strand at 4328.581 kb on + strand at 4328.588 kb on + strand at 4328.635 kb on - strand at 4328.640 kb on - strand at 4328.652 kb on + strand at 4328.652 kb on + strand at 4328.724 kb on + strand at 4328.732 kb on - strand at 4328.749 kb on - strand at 4328.754 kb on + strand at 4328.772 kb on - strand at 4328.773 kb on + strand at 4328.785 kb on - strand at 4328.791 kb on - strand at 4328.847 kb on - strand at 4328.869 kb on - strand at 4328.882 kb on - strand at 4328.924 kb on + strand at 4328.996 kb on - strand at 4329.006 kb on + strand at 4329.006 kb on + strand at 4329.006 kb on + strand at 4329.006 kb on + strand at 4329.006 kb on + strand at 4329.006 kb on + strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.014 kb on - strand at 4329.025 kb on + strand at 4329.033 kb on - strand at 4329.042 kb on + strand at 4329.042 kb on + strand at 4329.050 kb on - strand at 4329.050 kb on - strand at 4329.050 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 4,327,141 - Shewana3_3603 0.47 -0.8 4,327,150 + Shewana3_3603 0.48 +1.0 4,327,164 - Shewana3_3603 0.49 -1.1 4,327,213 + Shewana3_3603 0.54 -3.5 4,327,218 + Shewana3_3603 0.54 -0.8 4,327,221 - Shewana3_3603 0.54 -2.7 4,327,223 + Shewana3_3603 0.55 -2.4 4,327,494 + Shewana3_3603 0.79 +0.1 4,327,500 + Shewana3_3603 0.79 +0.2 4,327,508 - Shewana3_3603 0.80 -0.2 4,327,508 - Shewana3_3603 0.80 -0.8 4,327,676 - -1.2 4,327,824 - Shewana3_3604 0.20 -1.2 4,327,874 + Shewana3_3604 0.34 -2.1 4,328,112 + -1.1 4,328,127 - -0.1 4,328,193 + -1.0 4,328,200 - -1.2 4,328,208 - -2.4 4,328,265 - -0.8 4,328,319 + -0.6 4,328,410 - -2.0 4,328,567 + +1.7 4,328,581 + -2.2 4,328,588 + -1.4 4,328,635 - -0.5 4,328,640 - -0.0 4,328,652 + -1.0 4,328,652 + -0.9 4,328,724 + -0.3 4,328,732 - +0.2 4,328,749 - +0.9 4,328,754 + -0.1 4,328,772 - -0.4 4,328,773 + +2.7 4,328,785 - -0.2 4,328,791 - -0.4 4,328,847 - -0.3 4,328,869 - +0.1 4,328,882 - +0.3 4,328,924 + -1.3 4,328,996 - +0.3 4,329,006 + +1.1 4,329,006 + +0.4 4,329,006 + +0.7 4,329,006 + -0.1 4,329,006 + +2.7 4,329,006 + +0.1 4,329,014 - +0.1 4,329,014 - -1.9 4,329,014 - -0.4 4,329,014 - -0.4 4,329,014 - -0.2 4,329,014 - -0.9 4,329,014 - +0.3 4,329,014 - -0.8 4,329,014 - -0.8 4,329,014 - +0.3 4,329,014 - -0.1 4,329,014 - -1.3 4,329,025 + +0.1 4,329,033 - -0.2 4,329,042 + +2.7 4,329,042 + -0.8 4,329,050 - -0.7 4,329,050 - -1.3 4,329,050 - +0.5
Or see this region's nucleotide sequence