Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3592

Experiment: Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.05 mg/ml
4,312,214	+		Shewana3_3591	0.62	-0.6
4,312,214	+		Shewana3_3591	0.62	+0.1
4,312,245	+		Shewana3_3591	0.64	+0.3
4,312,276	+		Shewana3_3591	0.67	+1.1
4,312,336	-		Shewana3_3591	0.71	+0.9
4,312,368	+		Shewana3_3591	0.73	-0.8
4,312,368	+		Shewana3_3591	0.73	-0.5
4,312,376	-		Shewana3_3591	0.74	+0.9
4,312,391	+		Shewana3_3591	0.75	-0.2
4,312,398	+		Shewana3_3591	0.75	+0.2
4,312,399	-		Shewana3_3591	0.76	+0.1
4,312,553	+		Shewana3_3591	0.87	-0.6
4,312,755	+				-0.1
4,312,763	-				+0.4
4,312,831	-				+0.2
4,312,856	-				+0.6
4,312,968	+				-0.3
4,313,042	+				-1.8
4,313,052	-				+0.9
4,313,296	-				-1.3
4,313,296	-				+0.3
4,313,306	-				-1.8
4,313,375	+				-0.8
4,313,383	-				-2.0
4,313,416	+				-1.4
4,313,855	+		Shewana3_3592	0.25	-0.1
4,313,855	+		Shewana3_3592	0.25	-2.0
4,314,038	+		Shewana3_3592	0.31	-1.5
4,314,046	-		Shewana3_3592	0.32	-1.9
4,314,093	+		Shewana3_3592	0.33	-1.8
4,314,197	+		Shewana3_3592	0.37	-2.2
4,314,367	-		Shewana3_3592	0.43	-1.6
4,314,367	-		Shewana3_3592	0.43	-1.2
4,314,368	-		Shewana3_3592	0.43	-3.3
4,314,425	-		Shewana3_3592	0.45	-1.7
4,314,545	+		Shewana3_3592	0.49	-1.5
4,314,653	+		Shewana3_3592	0.53	-2.0
4,314,653	+		Shewana3_3592	0.53	-1.2
4,314,653	+		Shewana3_3592	0.53	-2.1
4,314,653	+		Shewana3_3592	0.53	-2.3
4,314,836	+		Shewana3_3592	0.59	-2.1
4,314,836	+		Shewana3_3592	0.59	-2.1
4,314,844	-		Shewana3_3592	0.60	-2.2
4,314,993	-		Shewana3_3592	0.65	-2.7
4,315,035	+		Shewana3_3592	0.66	-1.8
4,315,043	+		Shewana3_3592	0.67	-1.4
4,315,043	-		Shewana3_3592	0.67	-2.7
4,315,048	-		Shewana3_3592	0.67	-1.6
4,315,051	-		Shewana3_3592	0.67	-2.4
4,315,126	+		Shewana3_3592	0.69	-2.7
4,315,134	-		Shewana3_3592	0.70	-1.3
4,315,134	-		Shewana3_3592	0.70	-0.9
4,315,165	-		Shewana3_3592	0.71	-2.3
4,315,211	-		Shewana3_3592	0.72	-2.5
4,315,353	-		Shewana3_3592	0.77	-2.3
4,315,411	+		Shewana3_3592	0.79	-2.3
4,315,438	+		Shewana3_3592	0.80	-1.7
4,315,467	+		Shewana3_3592	0.81	-2.0
4,315,467	+		Shewana3_3592	0.81	-1.2
4,315,487	+		Shewana3_3592	0.82	-1.1
4,315,494	-		Shewana3_3592	0.82	-1.5
4,315,558	-		Shewana3_3592	0.85	-1.8
4,315,641	-		Shewana3_3592	0.88	-1.6
4,315,690	+		Shewana3_3592	0.89	-1.8
4,315,691	+		Shewana3_3592	0.89	-1.1
4,315,756	+				-1.8
4,315,919	-				-0.7
4,315,940	-				-0.6
4,315,984	-				-1.2
4,316,032	-				-0.4
4,316,135	+				-3.0
4,316,143	-		Shewana3_3593	0.11	+0.4
4,316,169	+		Shewana3_3593	0.19	-0.5
4,316,183	+		Shewana3_3593	0.23	-1.1
4,316,227	+		Shewana3_3593	0.36	+0.7
4,316,235	-		Shewana3_3593	0.38	-0.5
4,316,249	+		Shewana3_3593	0.42	-1.4
4,316,257	-		Shewana3_3593	0.44	-0.9
4,316,257	-		Shewana3_3593	0.44	-1.4
4,316,421	+				-1.1
4,316,423	+				-0.1
4,316,527	+				-0.4
4,316,527	+				-0.1
4,316,576	-				+0.2
4,316,595	-				+0.4
4,316,614	-				+0.1
4,316,624	+				-1.0
4,316,691	+		Shewana3_3594	0.15	-0.8
4,316,697	+		Shewana3_3594	0.16	-1.7
4,316,794	-		Shewana3_3594	0.25	+0.5
4,316,827	-		Shewana3_3594	0.29	-0.3