Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3454

Experiment: Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.05 mg/ml
4,136,848	+		Shewana3_3453	0.30	-2.0
4,136,908	+		Shewana3_3453	0.35	-1.8
4,136,916	-		Shewana3_3453	0.36	-2.2
4,136,916	-		Shewana3_3453	0.36	-0.6
4,136,916	-		Shewana3_3453	0.36	-1.6
4,136,918	+		Shewana3_3453	0.36	-0.7
4,137,039	+		Shewana3_3453	0.47	-0.3
4,137,335	-		Shewana3_3453	0.73	+0.5
4,137,385	+		Shewana3_3453	0.77	-0.3
4,137,408	+		Shewana3_3453	0.79	-0.3
4,137,408	+		Shewana3_3453	0.79	-0.7
4,137,423	-		Shewana3_3453	0.81	-0.4
4,137,573	+				-0.5
4,137,612	-				-1.1
4,137,694	-				-0.9
4,137,774	-				-0.5
4,137,781	+				-0.2
4,137,947	-		Shewana3_3454	0.16	+0.5
4,138,030	+		Shewana3_3454	0.21	-0.4
4,138,173	+		Shewana3_3454	0.31	-1.0
4,138,181	-		Shewana3_3454	0.32	+0.6
4,138,199	-		Shewana3_3454	0.33	-0.1
4,138,219	+		Shewana3_3454	0.35	-1.4
4,138,234	+		Shewana3_3454	0.36	-0.9
4,138,234	+		Shewana3_3454	0.36	-0.3
4,138,324	-		Shewana3_3454	0.42	+0.1
4,138,460	-		Shewana3_3454	0.51	-0.2
4,138,730	+		Shewana3_3454	0.70	+1.2
4,138,735	-		Shewana3_3454	0.71	+1.0
4,138,808	-		Shewana3_3454	0.76	+0.6
4,138,831	-		Shewana3_3454	0.77	-0.3
4,138,867	+		Shewana3_3454	0.80	-1.8
4,138,875	-		Shewana3_3454	0.80	-1.1
4,139,001	+		Shewana3_3454	0.89	-2.5
4,139,019	-				+0.5
4,139,185	-				-1.2
4,139,188	+				+0.5
4,139,196	-				-0.2
4,139,250	-				-0.2
4,139,288	+				+0.1
4,139,320	-				-0.6
4,139,336	+				+2.8
4,139,336	+				-0.4
4,139,344	-				-0.8
4,139,347	+				-0.6
4,139,347	+				-1.4
4,139,491	+		Shewana3_3455	0.17	-0.5
4,139,666	-		Shewana3_3455	0.26	-0.3
4,139,795	-		Shewana3_3455	0.32	-0.5
4,139,932	+		Shewana3_3455	0.39	-0.6
4,139,957	-		Shewana3_3455	0.40	+0.0