Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3070
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,681,396 | + | Shewana3_3069 | 0.64 | -1.0 | |
3,681,404 | - | Shewana3_3069 | 0.64 | -1.0 | |
3,681,776 | - | Shewana3_3069 | 0.86 | -2.6 | |
3,681,776 | - | Shewana3_3069 | 0.86 | -0.1 | |
3,681,883 | - | -0.9 | |||
3,681,969 | + | -1.5 | |||
3,682,034 | + | -2.0 | |||
3,682,126 | - | -1.3 | |||
3,682,145 | + | +1.1 | |||
3,682,242 | + | +1.4 | |||
3,682,334 | - | Shewana3_3070 | 0.12 | +0.6 | |
3,682,379 | + | Shewana3_3070 | 0.16 | -1.2 | |
3,682,394 | + | Shewana3_3070 | 0.18 | +0.5 | |
3,682,576 | - | Shewana3_3070 | 0.36 | -2.4 | |
3,682,658 | + | Shewana3_3070 | 0.44 | -0.2 | |
3,682,809 | + | Shewana3_3070 | 0.59 | -1.5 | |
3,683,020 | + | Shewana3_3070 | 0.79 | +0.5 | |
3,683,063 | + | Shewana3_3070 | 0.84 | -1.2 |
Or see this region's nucleotide sequence