Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2609
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,112,231 | - | Shewana3_2607 | 0.37 | +3.6 | |
3,112,301 | + | Shewana3_2607 | 0.53 | +0.7 | |
3,112,552 | + | +2.6 | |||
3,112,560 | - | -1.4 | |||
3,112,560 | - | -0.6 | |||
3,113,371 | + | Shewana3_2609 | 0.38 | -1.5 | |
3,113,583 | + | Shewana3_2609 | 0.84 | +0.4 | |
3,113,760 | - | +2.6 | |||
3,113,840 | - | +2.0 | |||
3,113,911 | - | +1.0 | |||
3,113,921 | + | +1.6 | |||
3,113,931 | - | +2.0 | |||
3,114,501 | - | Shewana3_2610 | 0.38 | +2.6 |
Or see this region's nucleotide sequence