Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2548
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,044,675 | - | Shewana3_2547 | 0.20 | +0.3 | |
3,044,816 | - | Shewana3_2547 | 0.39 | -0.2 | |
3,045,074 | + | Shewana3_2547 | 0.73 | -1.5 | |
3,045,172 | - | Shewana3_2547 | 0.86 | +1.6 | |
3,045,300 | + | +1.0 | |||
3,045,465 | - | +1.3 | |||
3,045,643 | - | Shewana3_2548 | 0.10 | -0.8 | |
3,046,148 | - | Shewana3_2548 | 0.40 | -0.8 | |
3,046,372 | - | Shewana3_2548 | 0.54 | +1.3 | |
3,046,494 | - | Shewana3_2548 | 0.61 | +1.0 | |
3,046,999 | - | -1.0 |
Or see this region's nucleotide sequence