Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2457 and Shewana3_2458 are separated by 261 nucleotides Shewana3_2458 and Shewana3_2459 are separated by 208 nucleotides Shewana3_2459 and Shewana3_2460 are separated by 406 nucleotides Shewana3_2460 and Shewana3_2461 are separated by 57 nucleotides
Shewana3_2457: Shewana3_2457 - peptidase M1, membrane alanine aminopeptidase (RefSeq), at 2,945,191 to 2,947,119
_2457
Shewana3_2458: Shewana3_2458 - peptidylprolyl isomerase, FKBP-type (RefSeq), at 2,947,381 to 2,947,869
_2458
Shewana3_2459: Shewana3_2459 - lytic murein transglycosylase (RefSeq), at 2,948,078 to 2,949,370
_2459
Shewana3_2460: Shewana3_2460 - hypothetical protein (RefSeq), at 2,949,777 to 2,950,136
_2460
Shewana3_2461: Shewana3_2461 - hypothetical protein (RefSeq), at 2,950,194 to 2,950,835
_2461
Position (kb)
2948
2949
2950 Strain fitness (log2 ratio)
-1
0
1
2 at 2947.379 kb on + strand at 2947.379 kb on + strand at 2947.387 kb on - strand at 2947.466 kb on - strand, within Shewana3_2458 at 2947.684 kb on - strand, within Shewana3_2458 at 2947.840 kb on - strand at 2947.847 kb on + strand at 2947.922 kb on - strand at 2947.941 kb on + strand at 2948.105 kb on - strand at 2948.165 kb on - strand at 2948.165 kb on - strand at 2948.254 kb on + strand, within Shewana3_2459 at 2948.432 kb on - strand, within Shewana3_2459 at 2948.687 kb on + strand, within Shewana3_2459 at 2948.710 kb on - strand, within Shewana3_2459 at 2948.760 kb on - strand, within Shewana3_2459 at 2948.843 kb on + strand, within Shewana3_2459 at 2948.843 kb on + strand, within Shewana3_2459 at 2948.901 kb on + strand, within Shewana3_2459 at 2949.082 kb on + strand, within Shewana3_2459 at 2949.130 kb on - strand, within Shewana3_2459 at 2949.166 kb on + strand, within Shewana3_2459 at 2949.166 kb on + strand, within Shewana3_2459 at 2949.748 kb on + strand at 2949.769 kb on + strand at 2949.780 kb on + strand at 2949.825 kb on - strand, within Shewana3_2460 at 2949.952 kb on + strand, within Shewana3_2460 at 2949.981 kb on - strand, within Shewana3_2460 at 2950.015 kb on + strand, within Shewana3_2460 at 2950.078 kb on + strand, within Shewana3_2460 at 2950.120 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 2,947,379 + -0.0 2,947,379 + +1.1 2,947,387 - -0.1 2,947,466 - Shewana3_2458 0.17 -0.8 2,947,684 - Shewana3_2458 0.62 -0.0 2,947,840 - +2.4 2,947,847 + +0.4 2,947,922 - +0.1 2,947,941 + -1.3 2,948,105 - -1.7 2,948,165 - -1.0 2,948,165 - -0.5 2,948,254 + Shewana3_2459 0.14 -0.0 2,948,432 - Shewana3_2459 0.27 -0.0 2,948,687 + Shewana3_2459 0.47 +1.9 2,948,710 - Shewana3_2459 0.49 -0.4 2,948,760 - Shewana3_2459 0.53 -1.6 2,948,843 + Shewana3_2459 0.59 +0.3 2,948,843 + Shewana3_2459 0.59 -1.1 2,948,901 + Shewana3_2459 0.64 +1.1 2,949,082 + Shewana3_2459 0.78 -0.1 2,949,130 - Shewana3_2459 0.81 +2.3 2,949,166 + Shewana3_2459 0.84 +0.6 2,949,166 + Shewana3_2459 0.84 +2.3 2,949,748 + +0.7 2,949,769 + +0.2 2,949,780 + +1.5 2,949,825 - Shewana3_2460 0.13 +0.2 2,949,952 + Shewana3_2460 0.49 +1.8 2,949,981 - Shewana3_2460 0.57 +1.1 2,950,015 + Shewana3_2460 0.66 +0.6 2,950,078 + Shewana3_2460 0.84 +2.1 2,950,120 + -0.4
Or see this region's nucleotide sequence