Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2445
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,931,491 | + | -0.8 | |||
2,931,534 | + | -0.7 | |||
2,931,548 | + | -0.8 | |||
2,931,548 | + | +0.1 | |||
2,931,556 | - | +2.0 | |||
2,931,667 | - | -0.7 | |||
2,931,669 | + | +3.0 | |||
2,931,669 | + | +1.4 | |||
2,931,672 | - | -2.5 | |||
2,931,677 | - | -0.1 | |||
2,931,784 | + | recR | Shewana3_2444 | 0.24 | +2.4 |
2,931,876 | - | recR | Shewana3_2444 | 0.39 | -1.4 |
2,931,884 | - | recR | Shewana3_2444 | 0.41 | -0.0 |
2,931,884 | - | recR | Shewana3_2444 | 0.41 | -3.1 |
2,931,884 | - | recR | Shewana3_2444 | 0.41 | -0.3 |
2,932,062 | - | recR | Shewana3_2444 | 0.70 | -0.5 |
2,932,099 | - | recR | Shewana3_2444 | 0.77 | -2.9 |
2,932,099 | - | recR | Shewana3_2444 | 0.77 | -1.4 |
2,932,206 | + | +4.0 | |||
2,932,356 | - | Shewana3_2445 | 0.31 | -1.7 | |
2,932,623 | - | +0.6 | |||
2,932,623 | - | +3.0 | |||
2,932,731 | + | -0.6 | |||
2,932,758 | + | +0.8 |
Or see this region's nucleotide sequence