Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2399
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,877,040 | - | Shewana3_2398 | 0.37 | +3.0 | |
| 2,877,289 | + | Shewana3_2398 | 0.78 | +4.0 | |
| 2,877,297 | - | Shewana3_2398 | 0.79 | +0.3 | |
| 2,877,833 | + | +0.2 | |||
| 2,877,963 | + | +3.0 | |||
| 2,878,143 | - | Shewana3_2399 | 0.22 | -0.6 | |
| 2,878,182 | - | Shewana3_2399 | 0.29 | +2.1 | |
| 2,878,348 | + | Shewana3_2399 | 0.61 | +2.2 | |
| 2,878,356 | - | Shewana3_2399 | 0.63 | +2.1 | |
| 2,878,484 | - | Shewana3_2399 | 0.88 | +0.7 | |
| 2,878,578 | - | +0.3 | |||
| 2,878,643 | - | +0.4 | |||
| 2,879,019 | - | Shewana3_2400 | 0.44 | +0.7 | |
| 2,879,157 | - | Shewana3_2400 | 0.58 | +2.0 | |
| 2,879,340 | + | Shewana3_2400 | 0.75 | +1.2 | |
| 2,879,452 | + | Shewana3_2400 | 0.86 | +2.0 | |
| 2,879,470 | + | Shewana3_2400 | 0.88 | +4.0 |
Or see this region's nucleotide sequence