Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2253
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,714,166 | - | Shewana3_2252 | 0.34 | +0.6 | |
2,714,454 | + | Shewana3_2252 | 0.62 | +2.4 | |
2,714,651 | - | Shewana3_2252 | 0.81 | -0.7 | |
2,715,074 | + | +1.0 | |||
2,715,120 | + | +4.0 | |||
2,715,163 | - | Shewana3_2253 | 0.13 | +0.6 | |
2,715,183 | + | Shewana3_2253 | 0.16 | +1.1 | |
2,715,183 | + | Shewana3_2253 | 0.16 | +0.4 | |
2,715,321 | - | Shewana3_2253 | 0.35 | +2.4 | |
2,715,658 | + | Shewana3_2253 | 0.82 | -0.0 | |
2,715,658 | + | Shewana3_2253 | 0.82 | +3.0 | |
2,715,658 | + | Shewana3_2253 | 0.82 | +1.5 | |
2,716,034 | - | +1.4 | |||
2,716,036 | + | +4.0 | |||
2,716,294 | - | +1.6 | |||
2,716,527 | + | Shewana3_2254 | 0.24 | +2.0 |
Or see this region's nucleotide sequence