Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2239
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,692,104 | + | +4.0 | |||
2,692,239 | + | +1.0 | |||
2,692,589 | + | +0.4 | |||
2,692,849 | + | Shewana3_2238 | 0.68 | +0.6 | |
2,692,873 | - | Shewana3_2238 | 0.75 | +1.2 | |
2,692,915 | + | Shewana3_2238 | 0.86 | -0.6 | |
2,692,937 | + | -0.4 | |||
2,693,018 | + | +0.7 | |||
2,693,072 | + | +0.4 | |||
2,693,284 | + | Shewana3_2239 | 0.42 | -0.8 | |
2,693,284 | + | Shewana3_2239 | 0.42 | -0.5 | |
2,693,284 | + | Shewana3_2239 | 0.42 | +0.2 | |
2,693,284 | + | Shewana3_2239 | 0.42 | -0.3 | |
2,693,292 | - | Shewana3_2239 | 0.44 | +2.4 | |
2,693,292 | - | Shewana3_2239 | 0.44 | -1.6 | |
2,693,448 | - | Shewana3_2239 | 0.78 | +4.0 | |
2,693,508 | + | +1.4 | |||
2,693,552 | + | +1.0 | |||
2,693,812 | + | Shewana3_2240 | 0.22 | +2.4 | |
2,693,995 | + | Shewana3_2240 | 0.43 | +1.4 | |
2,694,096 | - | Shewana3_2240 | 0.55 | +3.0 | |
2,694,179 | + | Shewana3_2240 | 0.64 | +0.1 | |
2,694,188 | + | Shewana3_2240 | 0.65 | +0.5 | |
2,694,456 | - | +0.4 | |||
2,694,539 | + | +0.3 | |||
2,694,539 | + | +1.4 |
Or see this region's nucleotide sequence