Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2233
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,684,216 | + | -0.2 | |||
2,684,405 | - | -0.0 | |||
2,684,472 | - | +1.9 | |||
2,684,716 | + | -0.8 | |||
2,684,731 | - | +1.4 | |||
2,685,112 | + | -1.4 | |||
2,685,114 | - | +1.6 | |||
2,685,206 | + | +1.6 | |||
2,685,402 | - | Shewana3_2233 | 0.30 | -0.9 | |
2,685,616 | + | Shewana3_2233 | 0.63 | +2.4 | |
2,685,810 | - | -0.6 | |||
2,686,034 | - | +2.0 | |||
2,686,035 | - | -0.7 | |||
2,686,096 | + | Shewana3_2234 | 0.12 | -2.7 | |
2,686,326 | - | Shewana3_2234 | 0.35 | +0.4 | |
2,686,453 | - | Shewana3_2234 | 0.47 | +0.1 | |
2,686,647 | + | Shewana3_2234 | 0.66 | +0.3 | |
2,686,655 | - | Shewana3_2234 | 0.66 | +0.2 | |
2,686,657 | + | Shewana3_2234 | 0.67 | +0.4 | |
2,686,752 | - | Shewana3_2234 | 0.76 | +0.4 | |
2,686,778 | + | Shewana3_2234 | 0.78 | +3.0 |
Or see this region's nucleotide sequence