Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2230
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,681,605 | - | Shewana3_2229 | 0.79 | +0.8 | |
2,682,079 | - | +0.6 | |||
2,682,342 | + | Shewana3_2230 | 0.11 | +3.0 | |
2,682,350 | - | Shewana3_2230 | 0.13 | -1.2 | |
2,682,374 | - | Shewana3_2230 | 0.18 | -0.3 | |
2,682,480 | - | Shewana3_2230 | 0.41 | -1.4 | |
2,682,589 | - | Shewana3_2230 | 0.64 | -0.0 | |
2,682,596 | - | Shewana3_2230 | 0.66 | -1.3 | |
2,682,685 | + | Shewana3_2230 | 0.85 | -0.0 | |
2,683,039 | + | Shewana3_2231 | 0.23 | -0.2 | |
2,683,150 | - | Shewana3_2231 | 0.32 | +0.5 | |
2,683,249 | - | Shewana3_2231 | 0.40 | +0.5 | |
2,683,416 | - | Shewana3_2231 | 0.53 | +2.4 | |
2,683,537 | - | Shewana3_2231 | 0.63 | +0.7 | |
2,683,605 | - | Shewana3_2231 | 0.68 | -1.0 | |
2,683,655 | - | Shewana3_2231 | 0.72 | +0.3 | |
2,683,673 | - | Shewana3_2231 | 0.74 | +0.3 | |
2,683,686 | + | Shewana3_2231 | 0.75 | +2.0 | |
2,683,694 | - | Shewana3_2231 | 0.75 | +0.1 |
Or see this region's nucleotide sequence