Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2210
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,655,043 | - | Shewana3_2209 | 0.49 | +2.0 | |
2,655,429 | + | Shewana3_2209 | 0.73 | -1.0 | |
2,656,238 | - | Shewana3_2210 | 0.48 | -0.4 | |
2,656,246 | + | Shewana3_2210 | 0.50 | +2.4 | |
2,656,254 | - | Shewana3_2210 | 0.52 | -1.5 | |
2,656,256 | + | Shewana3_2210 | 0.52 | +4.0 | |
2,656,256 | + | Shewana3_2210 | 0.52 | +3.0 | |
2,656,264 | - | Shewana3_2210 | 0.54 | -1.7 | |
2,656,264 | - | Shewana3_2210 | 0.54 | +0.8 | |
2,656,264 | - | Shewana3_2210 | 0.54 | -1.6 | |
2,656,264 | - | Shewana3_2210 | 0.54 | -0.4 | |
2,656,297 | - | Shewana3_2210 | 0.62 | -0.5 | |
2,656,303 | - | Shewana3_2210 | 0.63 | -0.7 | |
2,656,399 | + | Shewana3_2210 | 0.84 | +3.0 | |
2,656,479 | - | -0.4 | |||
2,656,842 | - | Shewana3_2211 | 0.26 | +1.4 | |
2,657,155 | - | Shewana3_2211 | 0.55 | +3.0 | |
2,657,294 | - | Shewana3_2211 | 0.68 | +4.0 | |
2,657,421 | + | Shewana3_2211 | 0.80 | +1.1 |
Or see this region's nucleotide sequence