Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2180

Experiment: Cisplatin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.05 mg/ml
2,613,982	+		Shewana3_2179	0.56	+3.0
2,613,982	+		Shewana3_2179	0.56	+3.0
2,613,989	-		Shewana3_2179	0.57	+4.0
2,613,990	-		Shewana3_2179	0.57	+3.0
2,613,990	-				+4.0
2,614,042	-		Shewana3_2179	0.63	+1.6
2,614,081	-		Shewana3_2179	0.67	+3.0
2,614,101	-		Shewana3_2179	0.70	+0.3
2,614,160	-		Shewana3_2179	0.76	+3.0
2,614,194	+		Shewana3_2179	0.80	+4.0
2,614,202	-		Shewana3_2179	0.81	-0.4
2,614,202	-		Shewana3_2179	0.81	-0.0
2,614,204	+		Shewana3_2179	0.81	+1.4
2,614,305	+				+0.5
2,614,305	+				+2.0
2,614,313	-				+3.0
2,614,314	+				+0.8
2,614,332	+				+1.6
2,614,374	+				+3.0
2,614,390	-				+4.0
2,614,408	+				+3.0
2,614,432	-				+1.4
2,614,511	-				+1.0
2,614,558	+				+4.0
2,614,589	-				-0.7
2,614,613	-				+2.0
2,614,615	-				-0.4
2,614,647	+				+2.4
2,614,653	-				+0.8
2,614,653	-				+0.5
2,614,655	-				-0.3
2,614,655	-				+1.6
2,614,787	-				+2.4
2,614,787	-				+3.4
2,614,787	-				+1.2
2,614,789	-				+0.6
2,614,837	-				-0.4
2,614,837	-				-1.0
2,614,847	-				+1.5
2,614,847	-				+2.0
2,614,847	-				+0.4
2,614,863	-				-0.7
2,614,912	-				-0.6
2,614,920	-				-1.8
2,614,944	-		Shewana3_2180	0.12	+0.6
2,614,944	-		Shewana3_2180	0.12	+0.1
2,614,963	-		Shewana3_2180	0.19	+0.3
2,614,963	-		Shewana3_2180	0.19	-1.6
2,614,963	-		Shewana3_2180	0.19	+0.3
2,614,963	-		Shewana3_2180	0.19	-0.6
2,614,963	-		Shewana3_2180	0.19	-0.7
2,614,963	-		Shewana3_2180	0.19	-1.3
2,614,963	-		Shewana3_2180	0.19	-1.2
2,614,963	-		Shewana3_2180	0.19	-2.3
2,614,963	-		Shewana3_2180	0.19	-1.4
2,614,963	-		Shewana3_2180	0.19	-0.3
2,614,963	-		Shewana3_2180	0.19	-0.7
2,614,965	-		Shewana3_2180	0.20	+0.6
2,615,132	-		Shewana3_2180	0.76	+0.5
2,615,199	-				+0.3
2,615,244	-				+2.0
2,615,342	+				+1.4
2,615,342	+				+4.0
2,615,350	-				-0.0
2,615,403	-		Shewana3_2181	0.11	-0.6
2,615,403	-		Shewana3_2181	0.11	-0.5
2,615,480	+		Shewana3_2181	0.20	+3.0
2,615,514	-		Shewana3_2181	0.24	+1.6
2,615,526	-		Shewana3_2181	0.26	+0.7
2,615,617	-		Shewana3_2181	0.37	+1.6
2,615,617	-		Shewana3_2181	0.37	+0.9
2,615,617	-		Shewana3_2181	0.37	+1.4
2,615,689	+		Shewana3_2181	0.46	+1.2
2,615,716	-		Shewana3_2181	0.49	+4.0
2,615,772	-		Shewana3_2181	0.56	+0.6
2,615,887	+		Shewana3_2181	0.70	+2.4
2,615,971	+		Shewana3_2181	0.81	+3.0
2,615,971	+		Shewana3_2181	0.81	+2.0
2,615,971	+		Shewana3_2181	0.81	+4.0
2,615,971	+		Shewana3_2181	0.81	+3.0
2,615,971	+		Shewana3_2181	0.81	+1.4
2,615,971	+		Shewana3_2181	0.81	+4.0
2,615,971	+		Shewana3_2181	0.81	+3.0
2,615,971	+		Shewana3_2181	0.81	-1.1
2,615,971	+		Shewana3_2181	0.81	+2.4
2,615,971	+		Shewana3_2181	0.81	+2.4
2,615,971	+		Shewana3_2181	0.81	+1.4
2,615,971	+		Shewana3_2181	0.81	+1.6
2,615,971	+		Shewana3_2181	0.81	+1.6
2,615,971	+		Shewana3_2181	0.81	+3.0
2,615,971	+		Shewana3_2181	0.81	+0.8
2,615,979	-		Shewana3_2181	0.82	+3.0
2,615,979	-		Shewana3_2181	0.82	+1.6
2,615,979	-		Shewana3_2181	0.82	+4.0
2,615,979	-		Shewana3_2181	0.82	+4.0
2,615,979	-		Shewana3_2181	0.82	+4.0
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,979	-		Shewana3_2181	0.82	+1.6
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,979	-		Shewana3_2181	0.82	+1.6
2,615,979	-		Shewana3_2181	0.82	+3.0
2,615,979	-		Shewana3_2181	0.82	+3.0
2,615,979	-		Shewana3_2181	0.82	+2.0
2,615,979	-		Shewana3_2181	0.82	+3.0
2,615,979	-		Shewana3_2181	0.82	+1.0
2,615,979	-		Shewana3_2181	0.82	+2.0
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,979	-		Shewana3_2181	0.82	+1.6
2,615,979	-		Shewana3_2181	0.82	+4.0
2,615,979	-		Shewana3_2181	0.82	+1.0
2,615,979	-		Shewana3_2181	0.82	+4.0
2,615,979	-		Shewana3_2181	0.82	+1.2
2,615,979	-		Shewana3_2181	0.82	-0.3
2,615,979	-		Shewana3_2181	0.82	+2.2
2,615,979	-		Shewana3_2181	0.82	+1.6
2,615,979	-		Shewana3_2181	0.82	+3.0
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,979	-		Shewana3_2181	0.82	+3.0
2,615,979	-		Shewana3_2181	0.82	+3.0
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,979	-		Shewana3_2181	0.82	+2.4
2,615,981	-		Shewana3_2181	0.82	+2.0
2,616,001	-		Shewana3_2181	0.84	+4.0
2,616,136	-				-0.4
2,616,183	-				+2.0