Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2093
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,512,758 | + | +1.1 | |||
2,512,779 | - | +2.9 | |||
2,512,930 | + | +2.9 | |||
2,513,140 | + | +0.9 | |||
2,513,143 | - | +1.1 | |||
2,513,143 | - | +2.9 | |||
2,513,143 | - | +2.3 | |||
2,513,243 | - | -0.5 | |||
2,513,302 | - | +1.6 | |||
2,513,302 | - | +3.9 | |||
2,513,451 | + | +1.9 | |||
2,513,554 | - | +3.9 | |||
2,513,554 | - | +1.1 | |||
2,513,561 | + | +3.9 | |||
2,513,647 | + | -0.3 | |||
2,513,655 | - | Shewana3_2093 | 0.12 | +1.3 | |
2,513,691 | + | Shewana3_2093 | 0.27 | +3.9 | |
2,513,876 | - | +1.9 | |||
2,513,953 | + | +0.7 | |||
2,514,008 | + | +1.1 | |||
2,514,016 | - | +0.2 | |||
2,514,336 | + | Shewana3_2094 | 0.40 | +0.7 | |
2,514,336 | + | Shewana3_2094 | 0.40 | +3.9 | |
2,514,359 | - | Shewana3_2094 | 0.43 | -0.8 | |
2,514,486 | + | Shewana3_2094 | 0.56 | +1.3 | |
2,514,486 | + | Shewana3_2094 | 0.56 | +1.9 | |
2,514,608 | - | Shewana3_2094 | 0.70 | -0.4 | |
2,514,646 | - | Shewana3_2094 | 0.74 | -0.1 | |
2,514,652 | + | Shewana3_2094 | 0.75 | +0.6 | |
2,514,698 | - | Shewana3_2094 | 0.80 | +1.6 | |
2,514,765 | - | Shewana3_2094 | 0.87 | +1.1 |
Or see this region's nucleotide sequence