Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2008
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,394,143 | - | Shewana3_2007 | 0.76 | +1.7 | |
2,394,346 | - | +1.7 | |||
2,394,475 | - | -0.7 | |||
2,394,809 | + | +1.0 | |||
2,394,820 | + | +3.0 | |||
2,394,828 | - | -0.2 | |||
2,394,929 | + | Shewana3_2008 | 0.16 | -0.1 | |
2,395,059 | + | Shewana3_2008 | 0.26 | -0.6 | |
2,395,678 | + | Shewana3_2008 | 0.74 | +0.3 | |
2,395,713 | + | Shewana3_2008 | 0.76 | +1.0 | |
2,395,714 | + | Shewana3_2008 | 0.76 | +2.0 | |
2,396,080 | - | +0.3 | |||
2,396,633 | + | Shewana3_2009 | 0.47 | -1.4 | |
2,396,891 | + | Shewana3_2009 | 0.65 | -0.2 | |
2,396,911 | - | Shewana3_2009 | 0.66 | +3.0 | |
2,397,018 | - | Shewana3_2009 | 0.74 | +3.0 |
Or see this region's nucleotide sequence