Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1840
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,181,415 | + | Shewana3_1839 | 0.34 | +1.0 | |
2,181,472 | - | Shewana3_1839 | 0.40 | +0.9 | |
2,181,757 | + | Shewana3_1839 | 0.74 | -0.7 | |
2,181,767 | + | Shewana3_1839 | 0.75 | +0.6 | |
2,182,031 | + | +2.6 | |||
2,182,275 | + | Shewana3_1840 | 0.29 | +0.5 | |
2,182,564 | + | Shewana3_1840 | 0.74 | -0.2 | |
2,182,572 | - | Shewana3_1840 | 0.76 | +1.0 | |
2,182,767 | - | +2.4 | |||
2,183,188 | - | Shewana3_1842 | 0.76 | +0.9 | |
2,183,197 | + | Shewana3_1842 | 0.79 | +0.6 | |
2,183,253 | + | +1.0 | |||
2,183,598 | - | Shewana3_1843 | 0.50 | +1.9 |
Or see this region's nucleotide sequence