Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1819 and Shewana3_1820 are separated by 5 nucleotides Shewana3_1820 and Shewana3_1821 overlap by 14 nucleotides
Shewana3_1819: Shewana3_1819 - hypothetical protein (RefSeq), at 2,147,878 to 2,151,342
_1819
Shewana3_1820: Shewana3_1820 - hypothetical protein (RefSeq), at 2,151,348 to 2,153,036
_1820
Shewana3_1821: Shewana3_1821 - hypothetical protein (RefSeq), at 2,153,023 to 2,155,062
_1821
Position (kb)
2151
2152
2153
2154 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2150.404 kb on - strand, within Shewana3_1819 at 2150.501 kb on + strand, within Shewana3_1819 at 2150.777 kb on - strand, within Shewana3_1819 at 2150.872 kb on + strand, within Shewana3_1819 at 2151.029 kb on - strand at 2151.220 kb on + strand at 2151.304 kb on - strand at 2151.304 kb on - strand at 2151.304 kb on - strand at 2151.391 kb on - strand at 2151.529 kb on + strand, within Shewana3_1820 at 2151.726 kb on - strand, within Shewana3_1820 at 2151.962 kb on + strand, within Shewana3_1820 at 2152.026 kb on - strand, within Shewana3_1820 at 2152.034 kb on + strand, within Shewana3_1820 at 2152.096 kb on + strand, within Shewana3_1820 at 2152.103 kb on + strand, within Shewana3_1820 at 2152.219 kb on + strand, within Shewana3_1820 at 2152.228 kb on + strand, within Shewana3_1820 at 2152.236 kb on - strand, within Shewana3_1820 at 2152.236 kb on - strand, within Shewana3_1820 at 2152.366 kb on - strand, within Shewana3_1820 at 2152.480 kb on - strand, within Shewana3_1820 at 2152.542 kb on + strand, within Shewana3_1820 at 2152.542 kb on + strand, within Shewana3_1820 at 2152.552 kb on + strand, within Shewana3_1820 at 2152.552 kb on + strand, within Shewana3_1820 at 2152.622 kb on + strand, within Shewana3_1820 at 2152.810 kb on + strand, within Shewana3_1820 at 2152.882 kb on - strand at 2153.068 kb on + strand at 2153.088 kb on + strand at 2153.114 kb on - strand at 2153.114 kb on - strand at 2153.327 kb on + strand, within Shewana3_1821 at 2153.329 kb on + strand, within Shewana3_1821 at 2153.453 kb on + strand, within Shewana3_1821 at 2153.514 kb on - strand, within Shewana3_1821 at 2153.984 kb on + strand, within Shewana3_1821 at 2154.017 kb on + strand, within Shewana3_1821 at 2154.035 kb on - strand, within Shewana3_1821
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 2,150,404 - Shewana3_1819 0.73 +1.9 2,150,501 + Shewana3_1819 0.76 +1.8 2,150,777 - Shewana3_1819 0.84 +1.4 2,150,872 + Shewana3_1819 0.86 +0.7 2,151,029 - +4.2 2,151,220 + +1.4 2,151,304 - +0.1 2,151,304 - -0.5 2,151,304 - -0.5 2,151,391 - -0.1 2,151,529 + Shewana3_1820 0.11 +0.6 2,151,726 - Shewana3_1820 0.22 +1.9 2,151,962 + Shewana3_1820 0.36 -1.0 2,152,026 - Shewana3_1820 0.40 +1.9 2,152,034 + Shewana3_1820 0.41 -0.4 2,152,096 + Shewana3_1820 0.44 +0.2 2,152,103 + Shewana3_1820 0.45 +1.6 2,152,219 + Shewana3_1820 0.52 -0.1 2,152,228 + Shewana3_1820 0.52 +0.6 2,152,236 - Shewana3_1820 0.53 +3.2 2,152,236 - Shewana3_1820 0.53 +2.6 2,152,366 - Shewana3_1820 0.60 +4.2 2,152,480 - Shewana3_1820 0.67 +2.6 2,152,542 + Shewana3_1820 0.71 +2.6 2,152,542 + Shewana3_1820 0.71 +0.2 2,152,552 + Shewana3_1820 0.71 +0.7 2,152,552 + Shewana3_1820 0.71 +0.6 2,152,622 + Shewana3_1820 0.75 -0.2 2,152,810 + Shewana3_1820 0.87 +0.5 2,152,882 - +3.2 2,153,068 + -0.0 2,153,088 + +3.5 2,153,114 - +2.6 2,153,114 - +4.2 2,153,327 + Shewana3_1821 0.15 +0.7 2,153,329 + Shewana3_1821 0.15 -0.0 2,153,453 + Shewana3_1821 0.21 +3.2 2,153,514 - Shewana3_1821 0.24 +4.2 2,153,984 + Shewana3_1821 0.47 -0.4 2,154,017 + Shewana3_1821 0.49 +1.2 2,154,035 - Shewana3_1821 0.50 +4.2
Or see this region's nucleotide sequence