Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1770
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,082,767 | + | Shewana3_1769 | 0.29 | +0.2 | |
| 2,083,180 | + | Shewana3_1769 | 0.80 | -1.0 | |
| 2,083,276 | + | -0.5 | |||
| 2,083,926 | + | yebU | Shewana3_1770 | 0.19 | +3.1 |
| 2,084,377 | - | yebU | Shewana3_1770 | 0.48 | -0.3 |
| 2,084,909 | - | yebU | Shewana3_1770 | 0.83 | +2.6 |
| 2,084,993 | + | yebU | Shewana3_1770 | 0.89 | +4.1 |
| 2,085,089 | + | +3.1 | |||
| 2,085,089 | + | +3.1 | |||
| 2,085,097 | - | +2.1 | |||
| 2,085,223 | + | +2.6 | |||
| 2,085,293 | + | +2.6 | |||
| 2,085,320 | - | +3.1 | |||
| 2,085,557 | + | Shewana3_1771 | 0.27 | +2.1 | |
| 2,085,607 | + | Shewana3_1771 | 0.31 | +2.1 | |
| 2,085,607 | + | Shewana3_1771 | 0.31 | -0.8 | |
| 2,085,607 | + | Shewana3_1771 | 0.31 | +3.1 | |
| 2,085,698 | + | Shewana3_1771 | 0.38 | +1.7 | |
| 2,085,804 | + | Shewana3_1771 | 0.47 | -0.4 | |
| 2,086,095 | + | Shewana3_1771 | 0.70 | -0.5 |
Or see this region's nucleotide sequence