Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1754
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,068,432 | - | Shewana3_1753 | 0.63 | +4.1 | |
2,068,471 | + | Shewana3_1753 | 0.64 | -1.3 | |
2,068,474 | + | Shewana3_1753 | 0.65 | -0.1 | |
2,068,499 | + | Shewana3_1753 | 0.66 | +0.6 | |
2,068,621 | + | Shewana3_1753 | 0.71 | -1.6 | |
2,068,865 | + | Shewana3_1753 | 0.82 | -1.0 | |
2,069,714 | - | -0.0 | |||
2,069,744 | - | +1.8 | |||
2,069,846 | + | Shewana3_1755 | 0.23 | +1.8 | |
2,069,918 | - | Shewana3_1755 | 0.33 | +2.4 | |
2,070,092 | + | Shewana3_1755 | 0.57 | +1.8 | |
2,070,092 | + | Shewana3_1755 | 0.57 | +1.6 | |
2,070,294 | - | Shewana3_1755 | 0.85 | -0.2 | |
2,070,451 | - | +1.1 | |||
2,070,451 | - | +1.6 | |||
2,070,463 | - | aat | Shewana3_1756 | 0.11 | +0.1 |
2,070,510 | - | aat | Shewana3_1756 | 0.17 | -0.7 |
Or see this region's nucleotide sequence