Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1647
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,938,433 | + | Shewana3_1646 | 0.84 | +0.3 | |
1,938,441 | - | Shewana3_1646 | 0.84 | -0.4 | |
1,938,597 | + | +0.5 | |||
1,938,597 | + | +0.0 | |||
1,938,855 | - | +1.4 | |||
1,939,078 | + | +4.0 | |||
1,939,162 | + | +2.4 | |||
1,939,312 | + | Shewana3_1647 | 0.47 | +0.2 | |
1,939,394 | - | Shewana3_1647 | 0.69 | -1.5 | |
1,939,409 | + | Shewana3_1647 | 0.72 | -0.0 | |
1,939,422 | + | Shewana3_1647 | 0.76 | +1.2 | |
1,939,465 | + | Shewana3_1647 | 0.87 | -2.0 | |
1,939,500 | + | +0.7 | |||
1,939,851 | + | Shewana3_1648 | 0.83 | +2.3 | |
1,939,851 | + | Shewana3_1648 | 0.83 | +0.4 | |
1,940,112 | - | +0.2 |
Or see this region's nucleotide sequence