Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1527
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,776,740 | - | Shewana3_1526 | 0.34 | +3.0 | |
1,776,793 | - | Shewana3_1526 | 0.39 | +1.6 | |
1,776,820 | - | Shewana3_1526 | 0.42 | +1.0 | |
1,777,334 | + | +0.3 | |||
1,777,342 | - | +4.0 | |||
1,777,393 | - | +1.4 | |||
1,777,558 | + | +0.8 | |||
1,777,602 | - | Shewana3_1527 | 0.16 | -0.7 | |
1,777,602 | - | Shewana3_1527 | 0.16 | -2.1 | |
1,777,602 | - | Shewana3_1527 | 0.16 | -1.5 | |
1,778,280 | - | Shewana3_1528 | 0.29 | +1.7 | |
1,778,646 | - | Shewana3_1528 | 0.79 | +0.7 |
Or see this region's nucleotide sequence