Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1487
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,731,342 | + | Shewana3_1486 | 0.69 | -0.8 | |
| 1,731,764 | + | Shewana3_1486 | 0.89 | -0.9 | |
| 1,731,772 | - | Shewana3_1486 | 0.89 | +3.9 | |
| 1,732,520 | - | Shewana3_1487 | 0.24 | +1.5 | |
| 1,732,877 | - | Shewana3_1487 | 0.54 | +3.9 | |
| 1,733,095 | + | Shewana3_1487 | 0.73 | -0.0 | |
| 1,733,165 | + | Shewana3_1487 | 0.79 | +0.7 | |
| 1,733,252 | + | Shewana3_1487 | 0.86 | +0.7 | |
| 1,733,366 | + | -2.2 | |||
| 1,733,673 | - | Shewana3_1488 | 0.11 | -0.5 | |
| 1,733,797 | - | Shewana3_1488 | 0.19 | -1.1 | |
| 1,733,798 | - | Shewana3_1488 | 0.19 | +0.5 | |
| 1,733,938 | + | Shewana3_1488 | 0.28 | +0.6 | |
| 1,734,030 | - | Shewana3_1488 | 0.35 | -0.8 | |
| 1,734,124 | - | Shewana3_1488 | 0.41 | +0.4 | |
| 1,734,124 | - | Shewana3_1488 | 0.41 | +0.6 | |
| 1,734,380 | + | Shewana3_1488 | 0.57 | -2.1 |
Or see this region's nucleotide sequence