Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1421
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,650,284 | + | Shewana3_1420 | 0.55 | -1.9 | |
1,650,284 | + | Shewana3_1420 | 0.55 | -0.4 | |
1,650,292 | - | Shewana3_1420 | 0.56 | +1.8 | |
1,650,342 | + | Shewana3_1420 | 0.59 | -0.8 | |
1,650,442 | + | Shewana3_1420 | 0.65 | +0.1 | |
1,650,641 | + | Shewana3_1420 | 0.77 | -1.7 | |
1,651,132 | + | +1.5 | |||
1,651,146 | + | +0.3 | |||
1,651,335 | + | Shewana3_1421 | 0.35 | -1.1 | |
1,651,335 | + | Shewana3_1421 | 0.35 | -0.8 | |
1,651,412 | + | Shewana3_1421 | 0.48 | +0.1 | |
1,651,529 | - | Shewana3_1421 | 0.69 | +0.8 | |
1,651,825 | - | +1.8 | |||
1,652,577 | + | Shewana3_1422 | 0.65 | +2.0 |
Or see this region's nucleotide sequence