Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_1298 and Shewana3_1299 are separated by 0 nucleotides Shewana3_1299 and Shewana3_1300 are separated by 245 nucleotides Shewana3_1300 and Shewana3_1301 are separated by 105 nucleotides
Shewana3_1298: Shewana3_1298 - hypothetical protein (RefSeq), at 1,511,704 to 1,512,651
_1298
Shewana3_1299: Shewana3_1299 - hypothetical protein (RefSeq), at 1,512,652 to 1,513,212
_1299
Shewana3_1300: Shewana3_1300 - hypothetical protein (RefSeq), at 1,513,458 to 1,513,937
_1300
Shewana3_1301: Shewana3_1301 - hypothetical protein (RefSeq), at 1,514,043 to 1,516,514
_1301
Position (kb)
1512
1513
1514 Strain fitness (log2 ratio)
-1
0
1
2 at 1511.696 kb on + strand at 1511.808 kb on + strand, within Shewana3_1298 at 1511.909 kb on + strand, within Shewana3_1298 at 1512.037 kb on + strand, within Shewana3_1298 at 1512.050 kb on - strand, within Shewana3_1298 at 1512.192 kb on + strand, within Shewana3_1298 at 1512.200 kb on - strand, within Shewana3_1298 at 1512.200 kb on - strand, within Shewana3_1298 at 1512.202 kb on - strand, within Shewana3_1298 at 1512.844 kb on - strand, within Shewana3_1299 at 1512.962 kb on + strand, within Shewana3_1299 at 1513.029 kb on + strand, within Shewana3_1299 at 1513.136 kb on + strand, within Shewana3_1299 at 1513.338 kb on - strand at 1513.340 kb on + strand at 1513.660 kb on - strand, within Shewana3_1300 at 1513.747 kb on + strand, within Shewana3_1300 at 1513.859 kb on - strand, within Shewana3_1300 at 1513.919 kb on + strand at 1513.919 kb on + strand at 1513.927 kb on - strand at 1513.976 kb on + strand at 1513.992 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 1,511,696 + -1.3 1,511,808 + Shewana3_1298 0.11 +1.2 1,511,909 + Shewana3_1298 0.22 +0.8 1,512,037 + Shewana3_1298 0.35 +0.2 1,512,050 - Shewana3_1298 0.36 +1.3 1,512,192 + Shewana3_1298 0.51 -0.9 1,512,200 - Shewana3_1298 0.52 +0.8 1,512,200 - Shewana3_1298 0.52 +0.1 1,512,202 - Shewana3_1298 0.53 +1.0 1,512,844 - Shewana3_1299 0.34 +1.2 1,512,962 + Shewana3_1299 0.55 +0.4 1,513,029 + Shewana3_1299 0.67 +2.6 1,513,136 + Shewana3_1299 0.86 +0.8 1,513,338 - +2.2 1,513,340 + -0.5 1,513,660 - Shewana3_1300 0.42 -1.7 1,513,747 + Shewana3_1300 0.60 -0.1 1,513,859 - Shewana3_1300 0.84 +0.6 1,513,919 + -0.4 1,513,919 + -0.2 1,513,927 - -0.8 1,513,976 + -0.9 1,513,992 - +1.0
Or see this region's nucleotide sequence