Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0756 and Shewana3_0757 are separated by 41 nucleotides Shewana3_0757 and Shewana3_0758 are separated by 234 nucleotides Shewana3_0758 and Shewana3_0759 are separated by 197 nucleotides
Shewana3_0756: Shewana3_0756 - hypothetical protein (RefSeq), at 877,644 to 878,144
_0756
Shewana3_0757: Shewana3_0757 - hypothetical protein (RefSeq), at 878,186 to 878,593
_0757
Shewana3_0758: Shewana3_0758 - hypothetical protein (RefSeq), at 878,828 to 879,613
_0758
Shewana3_0759: Shewana3_0759 - peptidase M13 (RefSeq), at 879,811 to 881,895
_0759
Position (kb) 878
879
880 Strain fitness (log2 ratio) -2
-1
0
1
2 at 878.005 kb on - strand, within Shewana3_0756 at 878.526 kb on - strand, within Shewana3_0757 at 878.578 kb on + strand at 878.625 kb on + strand at 878.700 kb on + strand at 878.801 kb on - strand at 878.881 kb on + strand at 878.910 kb on - strand, within Shewana3_0758 at 878.915 kb on + strand, within Shewana3_0758 at 878.928 kb on - strand, within Shewana3_0758 at 879.124 kb on + strand, within Shewana3_0758 at 879.191 kb on - strand, within Shewana3_0758 at 879.207 kb on - strand, within Shewana3_0758 at 879.281 kb on + strand, within Shewana3_0758 at 879.331 kb on + strand, within Shewana3_0758 at 879.414 kb on - strand, within Shewana3_0758 at 879.532 kb on - strand, within Shewana3_0758 at 879.642 kb on - strand at 879.878 kb on + strand at 879.886 kb on - strand at 879.886 kb on - strand at 879.886 kb on - strand at 879.934 kb on + strand at 879.942 kb on - strand at 880.132 kb on - strand, within Shewana3_0759 at 880.254 kb on - strand, within Shewana3_0759 at 880.417 kb on - strand, within Shewana3_0759 at 880.457 kb on + strand, within Shewana3_0759 at 880.463 kb on - strand, within Shewana3_0759
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 878,005 - Shewana3_0756 0.72 -1.0 878,526 - Shewana3_0757 0.83 -0.2 878,578 + -1.0 878,625 + +1.3 878,700 + -0.6 878,801 - -0.2 878,881 + -0.9 878,910 - Shewana3_0758 0.10 -1.1 878,915 + Shewana3_0758 0.11 +0.5 878,928 - Shewana3_0758 0.13 +1.8 879,124 + Shewana3_0758 0.38 -0.5 879,191 - Shewana3_0758 0.46 -1.7 879,207 - Shewana3_0758 0.48 -0.7 879,281 + Shewana3_0758 0.58 -0.0 879,331 + Shewana3_0758 0.64 -1.9 879,414 - Shewana3_0758 0.75 -2.2 879,532 - Shewana3_0758 0.90 -1.0 879,642 - +0.1 879,878 + -1.8 879,886 - -0.5 879,886 - -0.0 879,886 - +1.4 879,934 + -0.4 879,942 - +0.5 880,132 - Shewana3_0759 0.15 +0.2 880,254 - Shewana3_0759 0.21 +0.6 880,417 - Shewana3_0759 0.29 -0.2 880,457 + Shewana3_0759 0.31 +2.0 880,463 - Shewana3_0759 0.31 +0.5
Or see this region's nucleotide sequence