Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0734 and Shewana3_0735 are separated by 416 nucleotides Shewana3_0735 and Shewana3_0736 are separated by 142 nucleotides
Shewana3_0734: Shewana3_0734 - porin (RefSeq), at 852,715 to 853,779
_0734
Shewana3_0735: Shewana3_0735 - UBA/THIF-type NAD/FAD binding protein (RefSeq), at 854,196 to 855,029
_0735
Shewana3_0736: Shewana3_0736 - ATPase domain-containing protein (RefSeq), at 855,172 to 856,803
_0736
Position (kb) 854
855
856 Strain fitness (log2 ratio) -2
-1
0
1 at 853.359 kb on - strand, within Shewana3_0734 at 853.409 kb on - strand, within Shewana3_0734 at 853.592 kb on + strand, within Shewana3_0734 at 853.846 kb on - strand at 853.851 kb on - strand at 853.851 kb on - strand at 853.859 kb on - strand at 854.042 kb on + strand at 854.122 kb on + strand at 854.132 kb on + strand at 854.132 kb on + strand at 854.132 kb on + strand at 854.132 kb on + strand at 854.132 kb on + strand at 854.153 kb on + strand at 854.198 kb on - strand at 854.245 kb on + strand at 854.245 kb on + strand at 854.542 kb on + strand, within Shewana3_0735 at 854.581 kb on + strand, within Shewana3_0735 at 854.675 kb on - strand, within Shewana3_0735 at 854.855 kb on - strand, within Shewana3_0735 at 855.105 kb on + strand at 855.220 kb on + strand at 855.295 kb on - strand at 855.325 kb on + strand at 855.325 kb on + strand at 855.333 kb on - strand at 855.333 kb on - strand at 855.333 kb on - strand at 855.333 kb on - strand at 855.333 kb on - strand at 855.333 kb on - strand at 855.484 kb on + strand, within Shewana3_0736 at 855.493 kb on + strand, within Shewana3_0736 at 855.561 kb on - strand, within Shewana3_0736 at 855.580 kb on - strand, within Shewana3_0736 at 855.677 kb on - strand, within Shewana3_0736 at 855.735 kb on - strand, within Shewana3_0736 at 855.973 kb on + strand, within Shewana3_0736 at 855.991 kb on - strand, within Shewana3_0736
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 853,359 - Shewana3_0734 0.60 +0.7 853,409 - Shewana3_0734 0.65 -0.2 853,592 + Shewana3_0734 0.82 -1.0 853,846 - +0.3 853,851 - -1.4 853,851 - -0.5 853,859 - -0.6 854,042 + +0.5 854,122 + -1.3 854,132 + -0.4 854,132 + -0.0 854,132 + -0.6 854,132 + +0.5 854,132 + +0.6 854,153 + +0.2 854,198 - -0.3 854,245 + +1.0 854,245 + -0.3 854,542 + Shewana3_0735 0.41 -1.3 854,581 + Shewana3_0735 0.46 -1.3 854,675 - Shewana3_0735 0.57 -0.6 854,855 - Shewana3_0735 0.79 -1.1 855,105 + +1.3 855,220 + +0.5 855,295 - +0.1 855,325 + -0.2 855,325 + -0.5 855,333 - -0.6 855,333 - -2.3 855,333 - -1.2 855,333 - -1.3 855,333 - -0.0 855,333 - -1.6 855,484 + Shewana3_0736 0.19 +0.4 855,493 + Shewana3_0736 0.20 -1.9 855,561 - Shewana3_0736 0.24 -2.2 855,580 - Shewana3_0736 0.25 -0.6 855,677 - Shewana3_0736 0.31 -1.2 855,735 - Shewana3_0736 0.34 +0.9 855,973 + Shewana3_0736 0.49 -0.1 855,991 - Shewana3_0736 0.50 -1.3
Or see this region's nucleotide sequence