Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0627 and Shewana3_0628 are separated by 550 nucleotides Shewana3_0628 and Shewana3_0629 are separated by 118 nucleotides Shewana3_0629 and Shewana3_0630 are separated by 68 nucleotides
Shewana3_0627: Shewana3_0627 - hypothetical protein (RefSeq), at 736,683 to 737,444
_0627
Shewana3_0628: Shewana3_0628 - hypothetical protein (RefSeq), at 737,995 to 738,405
_0628
Shewana3_0629: Shewana3_0629 - hypothetical protein (RefSeq), at 738,524 to 738,754
_0629
Shewana3_0630: Shewana3_0630 - no description, at 738,823 to 741,005
_0630
Position (kb) 737
738
739 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 737.012 kb on - strand, within Shewana3_0627 at 737.028 kb on + strand, within Shewana3_0627 at 737.028 kb on + strand, within Shewana3_0627 at 737.111 kb on + strand, within Shewana3_0627 at 737.187 kb on - strand, within Shewana3_0627 at 737.252 kb on + strand, within Shewana3_0627 at 737.292 kb on - strand, within Shewana3_0627 at 737.300 kb on - strand, within Shewana3_0627 at 737.378 kb on + strand at 737.548 kb on + strand at 737.684 kb on - strand at 737.740 kb on - strand at 737.802 kb on + strand at 737.833 kb on + strand at 737.833 kb on + strand at 737.833 kb on + strand at 737.841 kb on - strand at 737.841 kb on - strand at 738.059 kb on + strand, within Shewana3_0628 at 738.249 kb on - strand, within Shewana3_0628 at 738.285 kb on + strand, within Shewana3_0628 at 738.327 kb on - strand, within Shewana3_0628 at 738.478 kb on + strand at 738.836 kb on + strand at 738.929 kb on + strand at 738.939 kb on + strand at 739.156 kb on - strand, within Shewana3_0630 at 739.214 kb on + strand, within Shewana3_0630 at 739.285 kb on + strand, within Shewana3_0630
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 737,012 - Shewana3_0627 0.43 -0.0 737,028 + Shewana3_0627 0.45 -0.5 737,028 + Shewana3_0627 0.45 -3.1 737,111 + Shewana3_0627 0.56 -1.7 737,187 - Shewana3_0627 0.66 -1.5 737,252 + Shewana3_0627 0.75 +0.2 737,292 - Shewana3_0627 0.80 -0.9 737,300 - Shewana3_0627 0.81 -2.1 737,378 + -1.1 737,548 + -1.2 737,684 - -0.0 737,740 - +0.1 737,802 + -0.7 737,833 + -0.0 737,833 + -1.0 737,833 + -0.7 737,841 - -0.3 737,841 - -0.0 738,059 + Shewana3_0628 0.16 -2.0 738,249 - Shewana3_0628 0.62 -0.1 738,285 + Shewana3_0628 0.71 -2.2 738,327 - Shewana3_0628 0.81 -0.4 738,478 + -1.1 738,836 + -0.4 738,929 + -1.0 738,939 + +0.2 739,156 - Shewana3_0630 0.15 -0.0 739,214 + Shewana3_0630 0.18 -0.7 739,285 + Shewana3_0630 0.21 +0.3
Or see this region's nucleotide sequence