Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0494 and Shewana3_0495 are separated by 119 nucleotides Shewana3_0495 and Shewana3_0496 are separated by 9 nucleotides Shewana3_0496 and Shewana3_0497 overlap by 4 nucleotides
Shewana3_0494: Shewana3_0494 - polysulphide reductase, NrfD (RefSeq), at 576,932 to 577,879
_0494
Shewana3_0495: Shewana3_0495 - no description, at 577,999 to 578,470
_0495
Shewana3_0496: Shewana3_0496 - periplasmic copper-binding (RefSeq), at 578,480 to 579,754
_0496
Shewana3_0497: Shewana3_0497 - ABC transporter related (RefSeq), at 579,751 to 580,797
_0497
Position (kb) 578
579
580 Strain fitness (log2 ratio) -1
0
1
2 at 577.549 kb on - strand, within Shewana3_0494 at 577.559 kb on - strand, within Shewana3_0494 at 577.884 kb on + strand at 578.142 kb on + strand, within Shewana3_0495 at 578.268 kb on + strand, within Shewana3_0495 at 578.350 kb on - strand, within Shewana3_0495 at 578.366 kb on - strand, within Shewana3_0495 at 578.727 kb on + strand, within Shewana3_0496 at 578.881 kb on + strand, within Shewana3_0496 at 578.889 kb on - strand, within Shewana3_0496 at 578.987 kb on + strand, within Shewana3_0496 at 579.168 kb on + strand, within Shewana3_0496 at 579.302 kb on - strand, within Shewana3_0496 at 579.304 kb on + strand, within Shewana3_0496 at 579.498 kb on + strand, within Shewana3_0496 at 579.563 kb on + strand, within Shewana3_0496 at 579.676 kb on - strand at 579.989 kb on - strand, within Shewana3_0497 at 579.994 kb on - strand, within Shewana3_0497 at 580.016 kb on + strand, within Shewana3_0497 at 580.147 kb on - strand, within Shewana3_0497 at 580.183 kb on - strand, within Shewana3_0497 at 580.232 kb on - strand, within Shewana3_0497 at 580.258 kb on + strand, within Shewana3_0497 at 580.268 kb on + strand, within Shewana3_0497 at 580.473 kb on + strand, within Shewana3_0497 at 580.473 kb on + strand, within Shewana3_0497 at 580.481 kb on - strand, within Shewana3_0497 at 580.710 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 577,549 - Shewana3_0494 0.65 -0.5 577,559 - Shewana3_0494 0.66 -1.6 577,884 + -0.6 578,142 + Shewana3_0495 0.30 -0.4 578,268 + Shewana3_0495 0.57 -0.9 578,350 - Shewana3_0495 0.74 -1.0 578,366 - Shewana3_0495 0.78 -0.7 578,727 + Shewana3_0496 0.19 -0.6 578,881 + Shewana3_0496 0.31 -1.1 578,889 - Shewana3_0496 0.32 +0.2 578,987 + Shewana3_0496 0.40 -0.2 579,168 + Shewana3_0496 0.54 -0.3 579,302 - Shewana3_0496 0.64 +0.3 579,304 + Shewana3_0496 0.65 -0.9 579,498 + Shewana3_0496 0.80 +2.6 579,563 + Shewana3_0496 0.85 -0.6 579,676 - -0.1 579,989 - Shewana3_0497 0.23 -1.6 579,994 - Shewana3_0497 0.23 +0.6 580,016 + Shewana3_0497 0.25 -0.6 580,147 - Shewana3_0497 0.38 +0.9 580,183 - Shewana3_0497 0.41 -0.7 580,232 - Shewana3_0497 0.46 -1.4 580,258 + Shewana3_0497 0.48 -0.1 580,268 + Shewana3_0497 0.49 -1.0 580,473 + Shewana3_0497 0.69 -0.8 580,473 + Shewana3_0497 0.69 +0.1 580,481 - Shewana3_0497 0.70 -0.1 580,710 + +0.3
Or see this region's nucleotide sequence