Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4364
Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
251,802 | - | Shewana3_4363 | 0.85 | -0.6 | |
252,015 | - | -0.6 | |||
252,022 | - | -0.1 | |||
252,022 | - | -1.2 | |||
252,022 | - | +0.2 | |||
252,480 | - | +0.2 | |||
252,545 | + | Shewana3_4364 | 0.16 | -1.0 | |
252,604 | - | Shewana3_4364 | 0.26 | -0.2 | |
252,704 | - | Shewana3_4364 | 0.42 | +0.6 | |
253,035 | - | -0.4 | |||
253,077 | - | -0.2 | |||
253,395 | - | Shewana3_4365 | 0.11 | +0.4 | |
253,733 | - | Shewana3_4365 | 0.35 | -0.5 | |
253,777 | - | Shewana3_4365 | 0.39 | -0.4 | |
253,887 | + | Shewana3_4365 | 0.47 | -1.6 | |
253,892 | + | Shewana3_4365 | 0.47 | -0.6 | |
253,895 | - | Shewana3_4365 | 0.47 | +0.1 | |
253,895 | - | Shewana3_4365 | 0.47 | +0.1 | |
254,045 | - | Shewana3_4365 | 0.58 | -0.1 |
Or see this region's nucleotide sequence