Experiment: Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_4275 and Shewana3_4276 are separated by 143 nucleotides Shewana3_4276 and Shewana3_4277 are separated by 120 nucleotides Shewana3_4277 and Shewana3_4278 are separated by 75 nucleotides
Shewana3_4275: Shewana3_4275 - hypothetical protein (RefSeq), at 156,887 to 157,792
_4275
Shewana3_4276: Shewana3_4276 - site-binding protein, DNA replication region (RefSeq), at 157,936 to 158,808
_4276
Shewana3_4277: Shewana3_4277 - OmpA/MotB domain-containing protein (RefSeq), at 158,929 to 159,672
_4277
Shewana3_4278: Shewana3_4278 - hypothetical protein (RefSeq), at 159,748 to 160,467
_4278
Position (kb) 157
158
159 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 157.103 kb on - strand, within Shewana3_4275 at 157.103 kb on - strand, within Shewana3_4275 at 157.120 kb on - strand, within Shewana3_4275 at 157.129 kb on - strand, within Shewana3_4275 at 157.507 kb on - strand, within Shewana3_4275 at 157.515 kb on - strand, within Shewana3_4275 at 157.601 kb on - strand, within Shewana3_4275 at 157.614 kb on - strand, within Shewana3_4275 at 157.694 kb on - strand, within Shewana3_4275 at 157.694 kb on - strand, within Shewana3_4275 at 157.824 kb on - strand at 158.143 kb on - strand, within Shewana3_4276 at 158.426 kb on + strand, within Shewana3_4276 at 158.445 kb on - strand, within Shewana3_4276 at 158.453 kb on - strand, within Shewana3_4276 at 158.550 kb on + strand, within Shewana3_4276 at 158.550 kb on + strand, within Shewana3_4276 at 158.550 kb on + strand, within Shewana3_4276 at 158.558 kb on - strand, within Shewana3_4276 at 158.558 kb on - strand, within Shewana3_4276 at 158.558 kb on - strand, within Shewana3_4276 at 158.618 kb on - strand, within Shewana3_4276 at 158.620 kb on - strand, within Shewana3_4276 at 158.806 kb on - strand at 159.088 kb on + strand, within Shewana3_4277 at 159.088 kb on + strand, within Shewana3_4277 at 159.096 kb on + strand, within Shewana3_4277 at 159.391 kb on - strand, within Shewana3_4277 at 159.449 kb on + strand, within Shewana3_4277 at 159.526 kb on - strand, within Shewana3_4277 at 159.612 kb on + strand at 159.635 kb on + strand at 159.663 kb on + strand at 159.671 kb on - strand at 159.671 kb on - strand at 159.765 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.05 mg/ml remove 157,103 - Shewana3_4275 0.24 -0.9 157,103 - Shewana3_4275 0.24 -1.6 157,120 - Shewana3_4275 0.26 -1.8 157,129 - Shewana3_4275 0.27 -1.5 157,507 - Shewana3_4275 0.68 -1.6 157,515 - Shewana3_4275 0.69 -0.5 157,601 - Shewana3_4275 0.79 -2.2 157,614 - Shewana3_4275 0.80 -0.9 157,694 - Shewana3_4275 0.89 -0.9 157,694 - Shewana3_4275 0.89 +1.1 157,824 - -0.7 158,143 - Shewana3_4276 0.24 -2.0 158,426 + Shewana3_4276 0.56 -3.6 158,445 - Shewana3_4276 0.58 -2.6 158,453 - Shewana3_4276 0.59 -2.5 158,550 + Shewana3_4276 0.70 -1.0 158,550 + Shewana3_4276 0.70 -1.0 158,550 + Shewana3_4276 0.70 -4.5 158,558 - Shewana3_4276 0.71 +0.5 158,558 - Shewana3_4276 0.71 -0.8 158,558 - Shewana3_4276 0.71 -2.0 158,618 - Shewana3_4276 0.78 +0.5 158,620 - Shewana3_4276 0.78 -2.2 158,806 - -2.0 159,088 + Shewana3_4277 0.21 +0.1 159,088 + Shewana3_4277 0.21 +0.5 159,096 + Shewana3_4277 0.22 -0.5 159,391 - Shewana3_4277 0.62 -1.0 159,449 + Shewana3_4277 0.70 -0.3 159,526 - Shewana3_4277 0.80 -0.4 159,612 + +0.1 159,635 + -0.3 159,663 + +0.5 159,671 - +0.1 159,671 - -2.0 159,765 + -1.8
Or see this region's nucleotide sequence