Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_763 and Pf6N2E2_764 are separated by 68 nucleotides Pf6N2E2_764 and Pf6N2E2_765 are separated by 91 nucleotides Pf6N2E2_765 and Pf6N2E2_766 are separated by 58 nucleotides
Pf6N2E2_763 - Sigma-54 dependent transcriptional regulator, at 874,118 to 875,443
_763
Pf6N2E2_764 - Fap amyloid fiber secretin, at 875,512 to 876,747
_764
Pf6N2E2_765 - Fap system putative outer membrane protein, at 876,839 to 877,585
_765
Pf6N2E2_766 - Fap protein with C39 domain, at 877,644 to 878,324
_766
Position (kb) 875
876
877 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 874.854 kb on + strand, within Pf6N2E2_763 at 874.855 kb on - strand, within Pf6N2E2_763 at 875.003 kb on + strand, within Pf6N2E2_763 at 875.003 kb on + strand, within Pf6N2E2_763 at 875.004 kb on - strand, within Pf6N2E2_763 at 875.006 kb on + strand, within Pf6N2E2_763 at 875.096 kb on + strand, within Pf6N2E2_763 at 875.306 kb on + strand, within Pf6N2E2_763 at 875.412 kb on - strand at 875.412 kb on - strand at 875.483 kb on + strand at 875.484 kb on - strand at 875.498 kb on + strand at 875.498 kb on + strand at 875.499 kb on - strand at 875.499 kb on - strand at 875.513 kb on + strand at 875.513 kb on + strand at 875.513 kb on + strand at 875.513 kb on + strand at 875.514 kb on - strand at 875.514 kb on - strand at 875.514 kb on - strand at 875.514 kb on - strand at 875.514 kb on - strand at 875.519 kb on + strand at 875.519 kb on + strand at 875.519 kb on + strand at 875.519 kb on + strand at 875.519 kb on + strand at 875.520 kb on - strand at 875.520 kb on - strand at 875.520 kb on - strand at 875.520 kb on - strand at 875.636 kb on + strand, within Pf6N2E2_764 at 875.637 kb on - strand, within Pf6N2E2_764 at 875.862 kb on + strand, within Pf6N2E2_764 at 875.862 kb on + strand at 875.862 kb on + strand, within Pf6N2E2_764 at 875.862 kb on + strand, within Pf6N2E2_764 at 875.862 kb on + strand, within Pf6N2E2_764 at 875.863 kb on - strand, within Pf6N2E2_764 at 875.870 kb on + strand, within Pf6N2E2_764 at 876.098 kb on + strand, within Pf6N2E2_764 at 876.098 kb on + strand, within Pf6N2E2_764 at 876.197 kb on + strand, within Pf6N2E2_764 at 876.197 kb on + strand, within Pf6N2E2_764 at 876.197 kb on + strand, within Pf6N2E2_764 at 876.197 kb on + strand, within Pf6N2E2_764 at 876.197 kb on + strand, within Pf6N2E2_764 at 876.198 kb on - strand, within Pf6N2E2_764 at 876.198 kb on - strand, within Pf6N2E2_764 at 876.258 kb on + strand, within Pf6N2E2_764 at 876.258 kb on + strand, within Pf6N2E2_764 at 876.258 kb on + strand, within Pf6N2E2_764 at 876.258 kb on + strand, within Pf6N2E2_764 at 876.259 kb on - strand, within Pf6N2E2_764 at 876.259 kb on - strand, within Pf6N2E2_764 at 876.386 kb on + strand, within Pf6N2E2_764 at 876.446 kb on + strand, within Pf6N2E2_764 at 876.446 kb on + strand, within Pf6N2E2_764 at 876.446 kb on + strand, within Pf6N2E2_764 at 876.663 kb on - strand at 876.754 kb on + strand at 876.755 kb on - strand at 876.755 kb on - strand at 876.788 kb on + strand at 876.788 kb on + strand at 876.788 kb on + strand at 876.789 kb on - strand at 876.797 kb on + strand at 876.797 kb on + strand at 876.797 kb on + strand at 876.798 kb on - strand at 876.798 kb on - strand at 876.798 kb on - strand at 876.798 kb on - strand at 876.798 kb on - strand at 876.798 kb on - strand at 876.808 kb on + strand at 876.808 kb on + strand at 876.835 kb on + strand at 876.835 kb on + strand at 876.835 kb on + strand at 876.835 kb on + strand at 876.836 kb on - strand at 876.836 kb on - strand at 876.836 kb on - strand at 876.959 kb on - strand, within Pf6N2E2_765 at 877.197 kb on + strand, within Pf6N2E2_765 at 877.197 kb on + strand, within Pf6N2E2_765 at 877.197 kb on + strand, within Pf6N2E2_765 at 877.198 kb on - strand, within Pf6N2E2_765 at 877.335 kb on + strand, within Pf6N2E2_765 at 877.335 kb on + strand, within Pf6N2E2_765 at 877.336 kb on - strand, within Pf6N2E2_765 at 877.417 kb on + strand, within Pf6N2E2_765 at 877.417 kb on + strand, within Pf6N2E2_765 at 877.418 kb on - strand, within Pf6N2E2_765 at 877.618 kb on + strand at 877.618 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.622 kb on + strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.623 kb on - strand at 877.663 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 874,854 + Pf6N2E2_763 0.56 +0.4 874,855 - Pf6N2E2_763 0.56 -3.9 875,003 + Pf6N2E2_763 0.67 -1.1 875,003 + Pf6N2E2_763 0.67 +0.3 875,004 - Pf6N2E2_763 0.67 +1.0 875,006 + Pf6N2E2_763 0.67 -0.2 875,096 + Pf6N2E2_763 0.74 -0.3 875,306 + Pf6N2E2_763 0.90 -0.6 875,412 - +1.0 875,412 - -0.2 875,483 + -1.4 875,484 - +0.9 875,498 + -0.1 875,498 + +0.6 875,499 - -0.8 875,499 - -0.1 875,513 + -1.7 875,513 + -0.1 875,513 + +1.1 875,513 + -0.3 875,514 - +2.5 875,514 - +3.3 875,514 - -1.4 875,514 - -2.0 875,514 - -0.6 875,519 + +0.8 875,519 + -1.0 875,519 + +0.3 875,519 + -0.4 875,519 + -0.9 875,520 - -1.7 875,520 - -0.5 875,520 - -1.4 875,520 - +0.9 875,636 + Pf6N2E2_764 0.10 -0.8 875,637 - Pf6N2E2_764 0.10 -0.9 875,862 + Pf6N2E2_764 0.28 -2.2 875,862 + +0.6 875,862 + Pf6N2E2_764 0.28 -1.4 875,862 + Pf6N2E2_764 0.28 -1.6 875,862 + Pf6N2E2_764 0.28 +2.3 875,863 - Pf6N2E2_764 0.28 +0.4 875,870 + Pf6N2E2_764 0.29 -2.3 876,098 + Pf6N2E2_764 0.47 -0.6 876,098 + Pf6N2E2_764 0.47 -0.4 876,197 + Pf6N2E2_764 0.55 -2.7 876,197 + Pf6N2E2_764 0.55 +0.2 876,197 + Pf6N2E2_764 0.55 -2.8 876,197 + Pf6N2E2_764 0.55 -0.1 876,197 + Pf6N2E2_764 0.55 -3.0 876,198 - Pf6N2E2_764 0.56 +0.9 876,198 - Pf6N2E2_764 0.56 -0.2 876,258 + Pf6N2E2_764 0.60 +0.3 876,258 + Pf6N2E2_764 0.60 -0.3 876,258 + Pf6N2E2_764 0.60 -0.4 876,258 + Pf6N2E2_764 0.60 -0.1 876,259 - Pf6N2E2_764 0.60 -2.5 876,259 - Pf6N2E2_764 0.60 -4.5 876,386 + Pf6N2E2_764 0.71 -0.2 876,446 + Pf6N2E2_764 0.76 +0.2 876,446 + Pf6N2E2_764 0.76 -0.4 876,446 + Pf6N2E2_764 0.76 +1.2 876,663 - +0.6 876,754 + -0.2 876,755 - +0.3 876,755 - -0.6 876,788 + -4.0 876,788 + +0.4 876,788 + +1.4 876,789 - +0.8 876,797 + +1.2 876,797 + +1.1 876,797 + -1.7 876,798 - +0.9 876,798 - -1.2 876,798 - -1.3 876,798 - -0.9 876,798 - -0.9 876,798 - -0.4 876,808 + -0.2 876,808 + -0.3 876,835 + +1.6 876,835 + -0.8 876,835 + +1.0 876,835 + -1.8 876,836 - -4.2 876,836 - +1.3 876,836 - +0.3 876,959 - Pf6N2E2_765 0.16 -0.3 877,197 + Pf6N2E2_765 0.48 -1.0 877,197 + Pf6N2E2_765 0.48 -2.5 877,197 + Pf6N2E2_765 0.48 -2.5 877,198 - Pf6N2E2_765 0.48 -0.0 877,335 + Pf6N2E2_765 0.66 +1.1 877,335 + Pf6N2E2_765 0.66 -2.4 877,336 - Pf6N2E2_765 0.67 +0.6 877,417 + Pf6N2E2_765 0.77 -3.1 877,417 + Pf6N2E2_765 0.77 +0.6 877,418 - Pf6N2E2_765 0.78 -1.8 877,618 + +0.2 877,618 + +1.0 877,622 + -0.2 877,622 + -0.9 877,622 + -0.5 877,623 - -1.7 877,623 - +0.4 877,623 - -0.3 877,623 - +1.8 877,623 - +0.7 877,623 - -0.4 877,663 - -1.8
Or see this region's nucleotide sequence