Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6024 and Pf6N2E2_6025 are separated by 50 nucleotides Pf6N2E2_6025 and Pf6N2E2_6026 are separated by 33 nucleotides Pf6N2E2_6026 and Pf6N2E2_6027 are separated by 335 nucleotides
Pf6N2E2_6024 - hypothetical protein, at 6,842,816 to 6,843,214
_6024
Pf6N2E2_6025 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 6,843,265 to 6,843,825
_6025
Pf6N2E2_6026 - Probable serine protease do-like precursor (EC 3.4.21.-), at 6,843,859 to 6,844,998
_6026
Pf6N2E2_6027 - hypothetical protein, at 6,845,334 to 6,846,344
_6027
Position (kb)
6843
6844
6845 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 6843.029 kb on + strand, within Pf6N2E2_6024 at 6843.029 kb on + strand, within Pf6N2E2_6024 at 6843.029 kb on + strand, within Pf6N2E2_6024 at 6843.029 kb on + strand, within Pf6N2E2_6024 at 6843.030 kb on - strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.047 kb on + strand, within Pf6N2E2_6024 at 6843.048 kb on - strand, within Pf6N2E2_6024 at 6843.048 kb on - strand, within Pf6N2E2_6024 at 6843.048 kb on - strand, within Pf6N2E2_6024 at 6843.110 kb on + strand, within Pf6N2E2_6024 at 6843.111 kb on - strand, within Pf6N2E2_6024 at 6843.240 kb on + strand at 6843.240 kb on + strand at 6843.347 kb on + strand, within Pf6N2E2_6025 at 6843.347 kb on + strand, within Pf6N2E2_6025 at 6843.347 kb on + strand, within Pf6N2E2_6025 at 6843.347 kb on + strand, within Pf6N2E2_6025 at 6843.424 kb on + strand, within Pf6N2E2_6025 at 6843.424 kb on + strand, within Pf6N2E2_6025 at 6843.425 kb on - strand, within Pf6N2E2_6025 at 6843.529 kb on + strand, within Pf6N2E2_6025 at 6843.529 kb on + strand, within Pf6N2E2_6025 at 6843.530 kb on - strand, within Pf6N2E2_6025 at 6843.589 kb on + strand, within Pf6N2E2_6025 at 6843.589 kb on + strand, within Pf6N2E2_6025 at 6843.589 kb on + strand, within Pf6N2E2_6025 at 6843.589 kb on + strand, within Pf6N2E2_6025 at 6843.590 kb on - strand, within Pf6N2E2_6025 at 6843.590 kb on - strand, within Pf6N2E2_6025 at 6843.623 kb on - strand, within Pf6N2E2_6025 at 6843.762 kb on + strand, within Pf6N2E2_6025 at 6843.763 kb on - strand, within Pf6N2E2_6025 at 6843.811 kb on - strand at 6843.811 kb on - strand at 6843.811 kb on - strand at 6843.811 kb on - strand at 6843.899 kb on + strand at 6843.899 kb on + strand at 6843.900 kb on - strand at 6843.900 kb on - strand at 6843.938 kb on - strand at 6843.976 kb on - strand, within Pf6N2E2_6026 at 6844.077 kb on - strand, within Pf6N2E2_6026 at 6844.077 kb on - strand, within Pf6N2E2_6026 at 6844.077 kb on - strand, within Pf6N2E2_6026 at 6844.168 kb on - strand, within Pf6N2E2_6026 at 6844.184 kb on + strand, within Pf6N2E2_6026 at 6844.239 kb on + strand, within Pf6N2E2_6026 at 6844.240 kb on - strand, within Pf6N2E2_6026 at 6844.240 kb on - strand, within Pf6N2E2_6026 at 6844.240 kb on - strand, within Pf6N2E2_6026 at 6844.251 kb on + strand, within Pf6N2E2_6026 at 6844.360 kb on + strand, within Pf6N2E2_6026 at 6844.361 kb on - strand, within Pf6N2E2_6026 at 6844.366 kb on + strand, within Pf6N2E2_6026 at 6844.367 kb on - strand, within Pf6N2E2_6026 at 6844.367 kb on - strand, within Pf6N2E2_6026 at 6844.367 kb on - strand, within Pf6N2E2_6026 at 6844.369 kb on + strand, within Pf6N2E2_6026 at 6844.370 kb on - strand, within Pf6N2E2_6026 at 6844.370 kb on - strand, within Pf6N2E2_6026 at 6844.432 kb on - strand, within Pf6N2E2_6026 at 6844.793 kb on + strand, within Pf6N2E2_6026 at 6844.844 kb on + strand, within Pf6N2E2_6026 at 6844.844 kb on + strand, within Pf6N2E2_6026 at 6844.844 kb on + strand, within Pf6N2E2_6026 at 6844.844 kb on + strand, within Pf6N2E2_6026 at 6844.844 kb on + strand, within Pf6N2E2_6026 at 6844.844 kb on + strand, within Pf6N2E2_6026 at 6844.845 kb on - strand, within Pf6N2E2_6026 at 6844.845 kb on - strand, within Pf6N2E2_6026 at 6844.845 kb on - strand, within Pf6N2E2_6026 at 6844.845 kb on - strand, within Pf6N2E2_6026 at 6844.847 kb on + strand, within Pf6N2E2_6026 at 6844.848 kb on - strand, within Pf6N2E2_6026 at 6844.848 kb on - strand, within Pf6N2E2_6026 at 6844.848 kb on - strand, within Pf6N2E2_6026 at 6844.848 kb on - strand, within Pf6N2E2_6026 at 6844.848 kb on - strand, within Pf6N2E2_6026 at 6844.848 kb on - strand, within Pf6N2E2_6026 at 6844.878 kb on - strand, within Pf6N2E2_6026 at 6844.910 kb on + strand at 6844.910 kb on + strand at 6844.910 kb on + strand at 6844.911 kb on - strand at 6844.911 kb on - strand at 6844.911 kb on - strand at 6844.954 kb on + strand at 6844.954 kb on + strand at 6845.024 kb on + strand at 6845.025 kb on - strand at 6845.027 kb on + strand at 6845.027 kb on + strand at 6845.028 kb on - strand at 6845.028 kb on - strand at 6845.119 kb on + strand at 6845.119 kb on + strand at 6845.119 kb on + strand at 6845.119 kb on + strand at 6845.119 kb on + strand at 6845.120 kb on - strand at 6845.120 kb on - strand at 6845.120 kb on - strand at 6845.120 kb on - strand at 6845.127 kb on - strand at 6845.332 kb on + strand at 6845.332 kb on + strand at 6845.332 kb on + strand at 6845.367 kb on + strand at 6845.367 kb on + strand at 6845.367 kb on + strand at 6845.368 kb on - strand at 6845.368 kb on - strand at 6845.368 kb on - strand at 6845.517 kb on + strand, within Pf6N2E2_6027 at 6845.517 kb on + strand, within Pf6N2E2_6027 at 6845.517 kb on + strand, within Pf6N2E2_6027 at 6845.550 kb on + strand, within Pf6N2E2_6027 at 6845.550 kb on + strand, within Pf6N2E2_6027 at 6845.617 kb on + strand, within Pf6N2E2_6027 at 6845.618 kb on - strand, within Pf6N2E2_6027 at 6845.618 kb on - strand, within Pf6N2E2_6027 at 6845.618 kb on - strand, within Pf6N2E2_6027 at 6845.651 kb on - strand, within Pf6N2E2_6027 at 6845.890 kb on + strand, within Pf6N2E2_6027 at 6845.950 kb on + strand, within Pf6N2E2_6027 at 6845.950 kb on + strand, within Pf6N2E2_6027 at 6845.951 kb on - strand, within Pf6N2E2_6027 at 6845.983 kb on + strand, within Pf6N2E2_6027 at 6845.983 kb on + strand, within Pf6N2E2_6027 at 6845.984 kb on - strand, within Pf6N2E2_6027
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 6,843,029 + Pf6N2E2_6024 0.53 +0.0 6,843,029 + Pf6N2E2_6024 0.53 +0.7 6,843,029 + Pf6N2E2_6024 0.53 -1.3 6,843,029 + Pf6N2E2_6024 0.53 +0.1 6,843,030 - Pf6N2E2_6024 0.54 -2.2 6,843,047 + Pf6N2E2_6024 0.58 +1.2 6,843,047 + Pf6N2E2_6024 0.58 -0.2 6,843,047 + Pf6N2E2_6024 0.58 +0.4 6,843,047 + Pf6N2E2_6024 0.58 +0.2 6,843,047 + Pf6N2E2_6024 0.58 -0.6 6,843,047 + Pf6N2E2_6024 0.58 +1.1 6,843,047 + Pf6N2E2_6024 0.58 +0.6 6,843,047 + Pf6N2E2_6024 0.58 -0.8 6,843,047 + Pf6N2E2_6024 0.58 -0.1 6,843,047 + Pf6N2E2_6024 0.58 -0.2 6,843,047 + Pf6N2E2_6024 0.58 +0.7 6,843,048 - Pf6N2E2_6024 0.58 -1.2 6,843,048 - Pf6N2E2_6024 0.58 -0.2 6,843,048 - Pf6N2E2_6024 0.58 +0.7 6,843,110 + Pf6N2E2_6024 0.74 +0.9 6,843,111 - Pf6N2E2_6024 0.74 +0.9 6,843,240 + +0.5 6,843,240 + +0.7 6,843,347 + Pf6N2E2_6025 0.15 -0.6 6,843,347 + Pf6N2E2_6025 0.15 +0.0 6,843,347 + Pf6N2E2_6025 0.15 -0.1 6,843,347 + Pf6N2E2_6025 0.15 +0.7 6,843,424 + Pf6N2E2_6025 0.28 +1.1 6,843,424 + Pf6N2E2_6025 0.28 +1.7 6,843,425 - Pf6N2E2_6025 0.29 +0.7 6,843,529 + Pf6N2E2_6025 0.47 +0.2 6,843,529 + Pf6N2E2_6025 0.47 -1.6 6,843,530 - Pf6N2E2_6025 0.47 +0.3 6,843,589 + Pf6N2E2_6025 0.58 -0.1 6,843,589 + Pf6N2E2_6025 0.58 +0.3 6,843,589 + Pf6N2E2_6025 0.58 -0.4 6,843,589 + Pf6N2E2_6025 0.58 -1.8 6,843,590 - Pf6N2E2_6025 0.58 +1.1 6,843,590 - Pf6N2E2_6025 0.58 -0.9 6,843,623 - Pf6N2E2_6025 0.64 -0.2 6,843,762 + Pf6N2E2_6025 0.89 -1.0 6,843,763 - Pf6N2E2_6025 0.89 -1.7 6,843,811 - +0.9 6,843,811 - -0.7 6,843,811 - +0.9 6,843,811 - +0.8 6,843,899 + +1.8 6,843,899 + -0.0 6,843,900 - +0.9 6,843,900 - -2.4 6,843,938 - +2.0 6,843,976 - Pf6N2E2_6026 0.10 -1.1 6,844,077 - Pf6N2E2_6026 0.19 -2.3 6,844,077 - Pf6N2E2_6026 0.19 +1.1 6,844,077 - Pf6N2E2_6026 0.19 +0.6 6,844,168 - Pf6N2E2_6026 0.27 +0.4 6,844,184 + Pf6N2E2_6026 0.29 +2.1 6,844,239 + Pf6N2E2_6026 0.33 +0.4 6,844,240 - Pf6N2E2_6026 0.33 +1.1 6,844,240 - Pf6N2E2_6026 0.33 +0.8 6,844,240 - Pf6N2E2_6026 0.33 -4.0 6,844,251 + Pf6N2E2_6026 0.34 +0.9 6,844,360 + Pf6N2E2_6026 0.44 -1.5 6,844,361 - Pf6N2E2_6026 0.44 -0.8 6,844,366 + Pf6N2E2_6026 0.44 +0.9 6,844,367 - Pf6N2E2_6026 0.45 +0.8 6,844,367 - Pf6N2E2_6026 0.45 +0.8 6,844,367 - Pf6N2E2_6026 0.45 -0.7 6,844,369 + Pf6N2E2_6026 0.45 +1.3 6,844,370 - Pf6N2E2_6026 0.45 -1.0 6,844,370 - Pf6N2E2_6026 0.45 -1.9 6,844,432 - Pf6N2E2_6026 0.50 +1.0 6,844,793 + Pf6N2E2_6026 0.82 +0.1 6,844,844 + Pf6N2E2_6026 0.86 +2.1 6,844,844 + Pf6N2E2_6026 0.86 -2.3 6,844,844 + Pf6N2E2_6026 0.86 +1.2 6,844,844 + Pf6N2E2_6026 0.86 +2.7 6,844,844 + Pf6N2E2_6026 0.86 +1.5 6,844,844 + Pf6N2E2_6026 0.86 -1.1 6,844,845 - Pf6N2E2_6026 0.86 -0.0 6,844,845 - Pf6N2E2_6026 0.86 -0.4 6,844,845 - Pf6N2E2_6026 0.86 +1.0 6,844,845 - Pf6N2E2_6026 0.86 -0.2 6,844,847 + Pf6N2E2_6026 0.87 +0.6 6,844,848 - Pf6N2E2_6026 0.87 +1.2 6,844,848 - Pf6N2E2_6026 0.87 +0.4 6,844,848 - Pf6N2E2_6026 0.87 -1.7 6,844,848 - Pf6N2E2_6026 0.87 +1.1 6,844,848 - Pf6N2E2_6026 0.87 +1.0 6,844,848 - Pf6N2E2_6026 0.87 +0.7 6,844,878 - Pf6N2E2_6026 0.89 -2.0 6,844,910 + +0.2 6,844,910 + +0.2 6,844,910 + -1.7 6,844,911 - +0.0 6,844,911 - +0.8 6,844,911 - -0.6 6,844,954 + -1.6 6,844,954 + +0.4 6,845,024 + +0.4 6,845,025 - -0.1 6,845,027 + -2.5 6,845,027 + +1.2 6,845,028 - +1.4 6,845,028 - +1.7 6,845,119 + +1.0 6,845,119 + +0.4 6,845,119 + -0.1 6,845,119 + -0.5 6,845,119 + -2.6 6,845,120 - -0.3 6,845,120 - -1.0 6,845,120 - -0.2 6,845,120 - +0.6 6,845,127 - -1.1 6,845,332 + +0.2 6,845,332 + +0.5 6,845,332 + +0.7 6,845,367 + +1.7 6,845,367 + +2.1 6,845,367 + +0.0 6,845,368 - -0.9 6,845,368 - +0.1 6,845,368 - -0.8 6,845,517 + Pf6N2E2_6027 0.18 +1.3 6,845,517 + Pf6N2E2_6027 0.18 +2.9 6,845,517 + Pf6N2E2_6027 0.18 +0.5 6,845,550 + Pf6N2E2_6027 0.21 -0.2 6,845,550 + Pf6N2E2_6027 0.21 +2.2 6,845,617 + Pf6N2E2_6027 0.28 -0.7 6,845,618 - Pf6N2E2_6027 0.28 +0.6 6,845,618 - Pf6N2E2_6027 0.28 +0.8 6,845,618 - Pf6N2E2_6027 0.28 +0.5 6,845,651 - Pf6N2E2_6027 0.31 +0.7 6,845,890 + Pf6N2E2_6027 0.55 +0.7 6,845,950 + Pf6N2E2_6027 0.61 -0.2 6,845,950 + Pf6N2E2_6027 0.61 -0.2 6,845,951 - Pf6N2E2_6027 0.61 +2.1 6,845,983 + Pf6N2E2_6027 0.64 -1.6 6,845,983 + Pf6N2E2_6027 0.64 -0.8 6,845,984 - Pf6N2E2_6027 0.64 +0.8
Or see this region's nucleotide sequence