Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5797

Experiment: Aluminum chloride 4 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_5796 and Pf6N2E2_5797 are separated by 239 nucleotidesPf6N2E2_5797 and Pf6N2E2_5798 are separated by 151 nucleotides Pf6N2E2_5796 - Septum site-determining protein MinD, at 6,613,371 to 6,614,144 _5796 Pf6N2E2_5797 - Septum site-determining protein MinC, at 6,614,384 to 6,615,088 _5797 Pf6N2E2_5798 - Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-), at 6,615,240 to 6,616,172 _5798 Position (kb) 6614 6615 6616Strain fitness (log2 ratio) -2 -1 0 1at 6614.292 kb on - strandat 6614.292 kb on - strandat 6614.292 kb on - strandat 6615.163 kb on - strandat 6615.163 kb on - strandat 6615.165 kb on - strandat 6615.205 kb on + strandat 6615.205 kb on + strandat 6615.206 kb on - strandat 6615.206 kb on - strandat 6615.206 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM
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6,614,292 - -0.8
6,614,292 - +0.1
6,614,292 - -1.4
6,615,163 - -1.0
6,615,163 - -0.8
6,615,165 - -0.7
6,615,205 + -0.3
6,615,205 + +0.3
6,615,206 - -2.4
6,615,206 - -0.4
6,615,206 - +0.1

Or see this region's nucleotide sequence