Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5744 and Pf6N2E2_5745 overlap by 4 nucleotides Pf6N2E2_5745 and Pf6N2E2_5746 overlap by 4 nucleotides Pf6N2E2_5746 and Pf6N2E2_5747 are separated by 43 nucleotides
Pf6N2E2_5744 - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21), at 6,560,726 to 6,561,781
_5744
Pf6N2E2_5745 - Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73), at 6,561,778 to 6,562,353
_5745
Pf6N2E2_5746 - Cobalamin synthase, at 6,562,350 to 6,563,081
_5746
Pf6N2E2_5747 - Two-component response regulator, at 6,563,125 to 6,563,730
_5747
Position (kb)
6561
6562
6563 Strain fitness (log2 ratio)
-1
0
1
2
3 at 6561.474 kb on - strand, within Pf6N2E2_5744 at 6561.897 kb on - strand, within Pf6N2E2_5745 at 6561.897 kb on - strand, within Pf6N2E2_5745 at 6561.897 kb on - strand, within Pf6N2E2_5745 at 6561.924 kb on + strand, within Pf6N2E2_5745 at 6561.925 kb on - strand, within Pf6N2E2_5745 at 6562.016 kb on + strand, within Pf6N2E2_5745 at 6562.016 kb on + strand, within Pf6N2E2_5745 at 6562.017 kb on - strand, within Pf6N2E2_5745 at 6562.079 kb on + strand, within Pf6N2E2_5745 at 6562.079 kb on + strand, within Pf6N2E2_5745 at 6562.103 kb on - strand, within Pf6N2E2_5745 at 6562.186 kb on + strand, within Pf6N2E2_5745 at 6562.186 kb on + strand, within Pf6N2E2_5745 at 6562.186 kb on + strand, within Pf6N2E2_5745 at 6562.187 kb on - strand, within Pf6N2E2_5745 at 6562.187 kb on - strand, within Pf6N2E2_5745 at 6562.187 kb on - strand, within Pf6N2E2_5745 at 6562.187 kb on - strand, within Pf6N2E2_5745 at 6562.824 kb on + strand, within Pf6N2E2_5746 at 6562.824 kb on + strand, within Pf6N2E2_5746 at 6562.824 kb on + strand, within Pf6N2E2_5746 at 6562.825 kb on - strand, within Pf6N2E2_5746 at 6562.825 kb on - strand, within Pf6N2E2_5746 at 6563.057 kb on - strand at 6563.134 kb on + strand at 6563.221 kb on - strand, within Pf6N2E2_5747
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 6,561,474 - Pf6N2E2_5744 0.71 +2.9 6,561,897 - Pf6N2E2_5745 0.21 +1.7 6,561,897 - Pf6N2E2_5745 0.21 +0.8 6,561,897 - Pf6N2E2_5745 0.21 +1.8 6,561,924 + Pf6N2E2_5745 0.25 -0.1 6,561,925 - Pf6N2E2_5745 0.26 +0.0 6,562,016 + Pf6N2E2_5745 0.41 +1.0 6,562,016 + Pf6N2E2_5745 0.41 +0.6 6,562,017 - Pf6N2E2_5745 0.41 +1.6 6,562,079 + Pf6N2E2_5745 0.52 +1.1 6,562,079 + Pf6N2E2_5745 0.52 +1.8 6,562,103 - Pf6N2E2_5745 0.56 +1.5 6,562,186 + Pf6N2E2_5745 0.71 +0.1 6,562,186 + Pf6N2E2_5745 0.71 +2.9 6,562,186 + Pf6N2E2_5745 0.71 -1.2 6,562,187 - Pf6N2E2_5745 0.71 -0.1 6,562,187 - Pf6N2E2_5745 0.71 +0.7 6,562,187 - Pf6N2E2_5745 0.71 +0.9 6,562,187 - Pf6N2E2_5745 0.71 +1.7 6,562,824 + Pf6N2E2_5746 0.65 +2.9 6,562,824 + Pf6N2E2_5746 0.65 -0.3 6,562,824 + Pf6N2E2_5746 0.65 +0.9 6,562,825 - Pf6N2E2_5746 0.65 +1.9 6,562,825 - Pf6N2E2_5746 0.65 +0.3 6,563,057 - +2.0 6,563,134 + -1.1 6,563,221 - Pf6N2E2_5747 0.16 +2.4
Or see this region's nucleotide sequence