Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5617 and Pf6N2E2_5618 are separated by 28 nucleotides Pf6N2E2_5618 and Pf6N2E2_5619 are separated by 283 nucleotides
Pf6N2E2_5617 - Iron-regulated protein A precursor, at 6,433,610 to 6,434,674
_5617
Pf6N2E2_5618 - Probable thiol oxidoreductase with 2 cytochrome c heme-binding sites, at 6,434,703 to 6,436,130
_5618
Pf6N2E2_5619 - Putative two-component system sensor kinase, at 6,436,414 to 6,437,754
_5619
Position (kb)
6434
6435
6436
6437 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 6433.704 kb on + strand at 6433.705 kb on - strand at 6433.705 kb on - strand at 6433.705 kb on - strand at 6433.705 kb on - strand at 6433.705 kb on - strand at 6433.798 kb on - strand, within Pf6N2E2_5617 at 6433.798 kb on - strand, within Pf6N2E2_5617 at 6434.193 kb on + strand, within Pf6N2E2_5617 at 6434.193 kb on + strand, within Pf6N2E2_5617 at 6434.193 kb on + strand, within Pf6N2E2_5617 at 6434.193 kb on + strand, within Pf6N2E2_5617 at 6434.194 kb on - strand, within Pf6N2E2_5617 at 6434.194 kb on - strand, within Pf6N2E2_5617 at 6434.194 kb on - strand, within Pf6N2E2_5617 at 6434.194 kb on - strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.247 kb on + strand, within Pf6N2E2_5617 at 6434.553 kb on + strand, within Pf6N2E2_5617 at 6434.553 kb on + strand, within Pf6N2E2_5617 at 6434.553 kb on + strand, within Pf6N2E2_5617 at 6434.553 kb on + strand, within Pf6N2E2_5617 at 6434.554 kb on - strand, within Pf6N2E2_5617 at 6434.554 kb on - strand, within Pf6N2E2_5617 at 6434.554 kb on - strand, within Pf6N2E2_5617 at 6434.554 kb on - strand, within Pf6N2E2_5617 at 6434.705 kb on - strand at 6435.037 kb on + strand, within Pf6N2E2_5618 at 6435.037 kb on + strand, within Pf6N2E2_5618 at 6435.037 kb on + strand, within Pf6N2E2_5618 at 6435.037 kb on + strand, within Pf6N2E2_5618 at 6435.038 kb on - strand, within Pf6N2E2_5618 at 6435.038 kb on - strand, within Pf6N2E2_5618 at 6435.038 kb on - strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.148 kb on + strand, within Pf6N2E2_5618 at 6435.149 kb on - strand, within Pf6N2E2_5618 at 6435.541 kb on + strand, within Pf6N2E2_5618 at 6435.542 kb on - strand, within Pf6N2E2_5618 at 6435.554 kb on + strand, within Pf6N2E2_5618 at 6435.576 kb on + strand, within Pf6N2E2_5618 at 6435.576 kb on + strand, within Pf6N2E2_5618 at 6435.576 kb on + strand, within Pf6N2E2_5618 at 6435.577 kb on - strand, within Pf6N2E2_5618 at 6435.577 kb on - strand, within Pf6N2E2_5618 at 6435.577 kb on - strand, within Pf6N2E2_5618 at 6435.623 kb on - strand, within Pf6N2E2_5618 at 6435.675 kb on + strand, within Pf6N2E2_5618 at 6435.676 kb on - strand, within Pf6N2E2_5618 at 6435.676 kb on - strand, within Pf6N2E2_5618 at 6435.676 kb on - strand, within Pf6N2E2_5618 at 6435.676 kb on - strand, within Pf6N2E2_5618 at 6435.688 kb on + strand, within Pf6N2E2_5618 at 6435.733 kb on + strand, within Pf6N2E2_5618 at 6435.733 kb on + strand, within Pf6N2E2_5618 at 6435.734 kb on - strand, within Pf6N2E2_5618 at 6435.762 kb on + strand, within Pf6N2E2_5618 at 6435.763 kb on - strand, within Pf6N2E2_5618 at 6435.763 kb on - strand, within Pf6N2E2_5618 at 6436.006 kb on - strand at 6436.107 kb on + strand at 6436.108 kb on - strand at 6436.173 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 6,433,704 + -1.1 6,433,705 - -1.0 6,433,705 - -0.9 6,433,705 - -1.1 6,433,705 - -2.3 6,433,705 - -3.1 6,433,798 - Pf6N2E2_5617 0.18 -0.4 6,433,798 - Pf6N2E2_5617 0.18 -1.3 6,434,193 + Pf6N2E2_5617 0.55 -1.2 6,434,193 + Pf6N2E2_5617 0.55 -0.5 6,434,193 + Pf6N2E2_5617 0.55 -1.6 6,434,193 + Pf6N2E2_5617 0.55 -1.7 6,434,194 - Pf6N2E2_5617 0.55 -2.7 6,434,194 - Pf6N2E2_5617 0.55 -1.0 6,434,194 - Pf6N2E2_5617 0.55 +1.4 6,434,194 - Pf6N2E2_5617 0.55 -0.7 6,434,247 + Pf6N2E2_5617 0.60 -1.1 6,434,247 + Pf6N2E2_5617 0.60 -3.5 6,434,247 + Pf6N2E2_5617 0.60 -3.3 6,434,247 + Pf6N2E2_5617 0.60 -0.6 6,434,247 + Pf6N2E2_5617 0.60 +0.4 6,434,247 + Pf6N2E2_5617 0.60 -2.1 6,434,247 + Pf6N2E2_5617 0.60 -0.7 6,434,247 + Pf6N2E2_5617 0.60 -3.8 6,434,247 + Pf6N2E2_5617 0.60 -0.2 6,434,247 + Pf6N2E2_5617 0.60 -4.4 6,434,247 + Pf6N2E2_5617 0.60 -1.2 6,434,553 + Pf6N2E2_5617 0.89 -3.7 6,434,553 + Pf6N2E2_5617 0.89 -0.6 6,434,553 + Pf6N2E2_5617 0.89 -1.1 6,434,553 + Pf6N2E2_5617 0.89 +0.6 6,434,554 - Pf6N2E2_5617 0.89 -3.2 6,434,554 - Pf6N2E2_5617 0.89 +0.6 6,434,554 - Pf6N2E2_5617 0.89 -0.4 6,434,554 - Pf6N2E2_5617 0.89 -1.0 6,434,705 - -0.1 6,435,037 + Pf6N2E2_5618 0.23 +0.2 6,435,037 + Pf6N2E2_5618 0.23 -0.7 6,435,037 + Pf6N2E2_5618 0.23 -1.0 6,435,037 + Pf6N2E2_5618 0.23 -0.6 6,435,038 - Pf6N2E2_5618 0.23 -1.2 6,435,038 - Pf6N2E2_5618 0.23 -1.7 6,435,038 - Pf6N2E2_5618 0.23 -0.9 6,435,148 + Pf6N2E2_5618 0.31 -0.4 6,435,148 + Pf6N2E2_5618 0.31 -2.5 6,435,148 + Pf6N2E2_5618 0.31 -2.0 6,435,148 + Pf6N2E2_5618 0.31 -1.0 6,435,148 + Pf6N2E2_5618 0.31 -0.5 6,435,148 + Pf6N2E2_5618 0.31 -0.6 6,435,148 + Pf6N2E2_5618 0.31 -0.7 6,435,148 + Pf6N2E2_5618 0.31 -1.2 6,435,149 - Pf6N2E2_5618 0.31 +0.6 6,435,541 + Pf6N2E2_5618 0.59 -1.6 6,435,542 - Pf6N2E2_5618 0.59 -2.7 6,435,554 + Pf6N2E2_5618 0.60 -1.3 6,435,576 + Pf6N2E2_5618 0.61 -0.5 6,435,576 + Pf6N2E2_5618 0.61 +0.1 6,435,576 + Pf6N2E2_5618 0.61 -1.5 6,435,577 - Pf6N2E2_5618 0.61 -1.6 6,435,577 - Pf6N2E2_5618 0.61 -3.6 6,435,577 - Pf6N2E2_5618 0.61 +0.0 6,435,623 - Pf6N2E2_5618 0.64 +0.3 6,435,675 + Pf6N2E2_5618 0.68 -3.0 6,435,676 - Pf6N2E2_5618 0.68 +0.3 6,435,676 - Pf6N2E2_5618 0.68 -2.8 6,435,676 - Pf6N2E2_5618 0.68 +0.5 6,435,676 - Pf6N2E2_5618 0.68 -0.3 6,435,688 + Pf6N2E2_5618 0.69 -1.0 6,435,733 + Pf6N2E2_5618 0.72 -1.9 6,435,733 + Pf6N2E2_5618 0.72 +1.6 6,435,734 - Pf6N2E2_5618 0.72 -1.0 6,435,762 + Pf6N2E2_5618 0.74 -1.8 6,435,763 - Pf6N2E2_5618 0.74 -1.4 6,435,763 - Pf6N2E2_5618 0.74 +0.3 6,436,006 - -0.9 6,436,107 + -0.6 6,436,108 - -1.3 6,436,173 - +1.0
Or see this region's nucleotide sequence