Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4619 and Pf6N2E2_4620 are separated by 0 nucleotides Pf6N2E2_4620 and Pf6N2E2_4621 overlap by 1 nucleotides Pf6N2E2_4621 and Pf6N2E2_4622 overlap by 8 nucleotides
Pf6N2E2_4619 - Malonate decarboxylase alpha subunit, at 5,349,122 to 5,350,792
_4619
Pf6N2E2_4620 - Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25), at 5,350,793 to 5,351,668
_4620
Pf6N2E2_4621 - Malonate decarboxylase delta subunit, at 5,351,668 to 5,351,967
_4621
Pf6N2E2_4622 - Malonate decarboxylase beta subunit, at 5,351,960 to 5,352,811
_4622
Position (kb) 5350
5351
5352 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5349.867 kb on - strand, within Pf6N2E2_4619 at 5349.944 kb on + strand, within Pf6N2E2_4619 at 5349.944 kb on + strand, within Pf6N2E2_4619 at 5349.945 kb on - strand, within Pf6N2E2_4619 at 5350.082 kb on + strand, within Pf6N2E2_4619 at 5350.083 kb on - strand, within Pf6N2E2_4619 at 5350.083 kb on - strand, within Pf6N2E2_4619 at 5350.169 kb on + strand, within Pf6N2E2_4619 at 5350.169 kb on + strand, within Pf6N2E2_4619 at 5350.490 kb on + strand, within Pf6N2E2_4619 at 5350.535 kb on + strand, within Pf6N2E2_4619 at 5350.535 kb on + strand, within Pf6N2E2_4619 at 5350.536 kb on - strand, within Pf6N2E2_4619 at 5350.536 kb on - strand, within Pf6N2E2_4619 at 5350.541 kb on + strand, within Pf6N2E2_4619 at 5350.541 kb on + strand, within Pf6N2E2_4619 at 5350.541 kb on + strand, within Pf6N2E2_4619 at 5350.541 kb on + strand, within Pf6N2E2_4619 at 5350.542 kb on - strand, within Pf6N2E2_4619 at 5350.542 kb on - strand, within Pf6N2E2_4619 at 5350.542 kb on - strand, within Pf6N2E2_4619 at 5350.542 kb on - strand, within Pf6N2E2_4619 at 5350.760 kb on + strand at 5350.761 kb on - strand at 5350.761 kb on - strand at 5350.761 kb on - strand at 5350.761 kb on - strand at 5350.761 kb on - strand at 5350.761 kb on - strand at 5350.761 kb on - strand at 5350.790 kb on + strand at 5350.790 kb on + strand at 5350.791 kb on - strand at 5351.276 kb on + strand, within Pf6N2E2_4620 at 5351.284 kb on - strand, within Pf6N2E2_4620 at 5351.445 kb on - strand, within Pf6N2E2_4620 at 5351.445 kb on - strand, within Pf6N2E2_4620 at 5351.630 kb on - strand at 5351.678 kb on + strand at 5351.678 kb on + strand at 5351.679 kb on - strand at 5351.679 kb on - strand at 5352.046 kb on + strand, within Pf6N2E2_4622 at 5352.046 kb on + strand, within Pf6N2E2_4622 at 5352.047 kb on - strand, within Pf6N2E2_4622 at 5352.047 kb on - strand, within Pf6N2E2_4622 at 5352.047 kb on - strand, within Pf6N2E2_4622 at 5352.396 kb on - strand, within Pf6N2E2_4622 at 5352.396 kb on - strand, within Pf6N2E2_4622 at 5352.473 kb on + strand, within Pf6N2E2_4622 at 5352.551 kb on + strand, within Pf6N2E2_4622 at 5352.629 kb on + strand at 5352.629 kb on + strand, within Pf6N2E2_4622 at 5352.630 kb on - strand, within Pf6N2E2_4622 at 5352.630 kb on - strand, within Pf6N2E2_4622 at 5352.630 kb on - strand, within Pf6N2E2_4622 at 5352.630 kb on - strand, within Pf6N2E2_4622
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 5,349,867 - Pf6N2E2_4619 0.45 -1.6 5,349,944 + Pf6N2E2_4619 0.49 +0.3 5,349,944 + Pf6N2E2_4619 0.49 +1.4 5,349,945 - Pf6N2E2_4619 0.49 -0.1 5,350,082 + Pf6N2E2_4619 0.57 +0.9 5,350,083 - Pf6N2E2_4619 0.58 +1.0 5,350,083 - Pf6N2E2_4619 0.58 -2.0 5,350,169 + Pf6N2E2_4619 0.63 +0.9 5,350,169 + Pf6N2E2_4619 0.63 +1.0 5,350,490 + Pf6N2E2_4619 0.82 -4.4 5,350,535 + Pf6N2E2_4619 0.85 -1.6 5,350,535 + Pf6N2E2_4619 0.85 -0.5 5,350,536 - Pf6N2E2_4619 0.85 -3.7 5,350,536 - Pf6N2E2_4619 0.85 +0.7 5,350,541 + Pf6N2E2_4619 0.85 +0.9 5,350,541 + Pf6N2E2_4619 0.85 +0.4 5,350,541 + Pf6N2E2_4619 0.85 +0.7 5,350,541 + Pf6N2E2_4619 0.85 +0.6 5,350,542 - Pf6N2E2_4619 0.85 +1.3 5,350,542 - Pf6N2E2_4619 0.85 +0.4 5,350,542 - Pf6N2E2_4619 0.85 -0.8 5,350,542 - Pf6N2E2_4619 0.85 +0.4 5,350,760 + -0.0 5,350,761 - -0.5 5,350,761 - +0.5 5,350,761 - -0.7 5,350,761 - -1.2 5,350,761 - -0.3 5,350,761 - +0.2 5,350,761 - +0.4 5,350,790 + +0.2 5,350,790 + -1.5 5,350,791 - +2.1 5,351,276 + Pf6N2E2_4620 0.55 -0.0 5,351,284 - Pf6N2E2_4620 0.56 -1.0 5,351,445 - Pf6N2E2_4620 0.74 -1.1 5,351,445 - Pf6N2E2_4620 0.74 -0.9 5,351,630 - +1.7 5,351,678 + +0.0 5,351,678 + -2.5 5,351,679 - +0.5 5,351,679 - -0.5 5,352,046 + Pf6N2E2_4622 0.10 +0.0 5,352,046 + Pf6N2E2_4622 0.10 +0.6 5,352,047 - Pf6N2E2_4622 0.10 -0.8 5,352,047 - Pf6N2E2_4622 0.10 +0.3 5,352,047 - Pf6N2E2_4622 0.10 +1.1 5,352,396 - Pf6N2E2_4622 0.51 +1.1 5,352,396 - Pf6N2E2_4622 0.51 -1.0 5,352,473 + Pf6N2E2_4622 0.60 +1.1 5,352,551 + Pf6N2E2_4622 0.69 -0.0 5,352,629 + +2.6 5,352,629 + Pf6N2E2_4622 0.79 +0.4 5,352,630 - Pf6N2E2_4622 0.79 +1.5 5,352,630 - Pf6N2E2_4622 0.79 +0.7 5,352,630 - Pf6N2E2_4622 0.79 -3.1 5,352,630 - Pf6N2E2_4622 0.79 -0.6
Or see this region's nucleotide sequence