Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4334 and Pf6N2E2_4335 overlap by 4 nucleotides Pf6N2E2_4335 and Pf6N2E2_4336 are separated by 81 nucleotides Pf6N2E2_4336 and Pf6N2E2_4337 are separated by 415 nucleotides
Pf6N2E2_4334 - Uncharacterized protein ImpC, at 5,056,173 to 5,057,675
_4334
Pf6N2E2_4335 - Uncharacterized protein ImpB, at 5,057,672 to 5,058,178
_4335
Pf6N2E2_4336 - Uncharacterized protein ImpA, at 5,058,260 to 5,059,303
_4336
Pf6N2E2_4337 - Uncharacterized protein ImpI/VasC, at 5,059,719 to 5,061,218
_4337
Position (kb) 5058
5059
5060 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5057.362 kb on + strand, within Pf6N2E2_4334 at 5057.363 kb on - strand, within Pf6N2E2_4334 at 5057.657 kb on + strand at 5057.657 kb on + strand at 5057.657 kb on + strand at 5057.658 kb on - strand at 5057.658 kb on - strand at 5057.658 kb on - strand at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.778 kb on + strand, within Pf6N2E2_4335 at 5057.779 kb on - strand, within Pf6N2E2_4335 at 5057.779 kb on - strand, within Pf6N2E2_4335 at 5057.779 kb on - strand, within Pf6N2E2_4335 at 5057.779 kb on - strand, within Pf6N2E2_4335 at 5057.779 kb on - strand, within Pf6N2E2_4335 at 5058.056 kb on + strand, within Pf6N2E2_4335 at 5058.099 kb on + strand, within Pf6N2E2_4335 at 5058.261 kb on + strand at 5058.262 kb on - strand at 5058.408 kb on + strand, within Pf6N2E2_4336 at 5058.408 kb on + strand, within Pf6N2E2_4336 at 5058.408 kb on + strand, within Pf6N2E2_4336 at 5058.408 kb on + strand, within Pf6N2E2_4336 at 5058.409 kb on - strand, within Pf6N2E2_4336 at 5058.409 kb on - strand, within Pf6N2E2_4336 at 5058.409 kb on - strand, within Pf6N2E2_4336 at 5058.409 kb on - strand, within Pf6N2E2_4336 at 5058.409 kb on - strand, within Pf6N2E2_4336 at 5058.411 kb on + strand, within Pf6N2E2_4336 at 5058.412 kb on - strand, within Pf6N2E2_4336 at 5058.412 kb on - strand, within Pf6N2E2_4336 at 5058.412 kb on - strand, within Pf6N2E2_4336 at 5058.487 kb on + strand, within Pf6N2E2_4336 at 5058.487 kb on + strand, within Pf6N2E2_4336 at 5058.996 kb on + strand, within Pf6N2E2_4336 at 5058.996 kb on + strand, within Pf6N2E2_4336 at 5058.996 kb on + strand, within Pf6N2E2_4336 at 5058.997 kb on - strand, within Pf6N2E2_4336 at 5058.997 kb on - strand, within Pf6N2E2_4336 at 5059.239 kb on + strand at 5059.240 kb on - strand at 5059.399 kb on + strand at 5059.400 kb on - strand at 5059.434 kb on - strand at 5059.460 kb on + strand at 5059.463 kb on + strand at 5059.464 kb on - strand at 5059.464 kb on - strand at 5059.464 kb on - strand at 5059.464 kb on - strand at 5059.464 kb on - strand at 5059.464 kb on - strand at 5059.468 kb on - strand at 5059.482 kb on + strand at 5059.483 kb on - strand at 5059.483 kb on - strand at 5059.483 kb on - strand at 5059.487 kb on + strand at 5059.487 kb on + strand at 5059.488 kb on - strand at 5059.488 kb on - strand at 5059.488 kb on - strand at 5059.501 kb on - strand at 5059.511 kb on + strand at 5059.511 kb on + strand at 5059.512 kb on - strand at 5059.596 kb on - strand at 5059.596 kb on - strand at 5059.700 kb on + strand at 5059.701 kb on - strand at 5059.736 kb on + strand at 5059.736 kb on + strand at 5059.736 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.742 kb on + strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.743 kb on - strand at 5059.746 kb on + strand at 5059.746 kb on + strand at 5059.747 kb on - strand at 5059.747 kb on - strand at 5059.747 kb on - strand at 5059.747 kb on - strand at 5059.834 kb on + strand at 5059.884 kb on + strand, within Pf6N2E2_4337 at 5059.884 kb on + strand, within Pf6N2E2_4337 at 5059.884 kb on + strand, within Pf6N2E2_4337 at 5059.885 kb on - strand, within Pf6N2E2_4337 at 5059.900 kb on - strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.902 kb on + strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.903 kb on - strand, within Pf6N2E2_4337 at 5059.907 kb on - strand, within Pf6N2E2_4337 at 5059.914 kb on - strand, within Pf6N2E2_4337 at 5059.922 kb on + strand, within Pf6N2E2_4337 at 5060.013 kb on + strand, within Pf6N2E2_4337 at 5060.013 kb on + strand, within Pf6N2E2_4337 at 5060.013 kb on + strand, within Pf6N2E2_4337 at 5060.014 kb on - strand, within Pf6N2E2_4337 at 5060.144 kb on + strand, within Pf6N2E2_4337 at 5060.144 kb on + strand, within Pf6N2E2_4337 at 5060.144 kb on + strand, within Pf6N2E2_4337 at 5060.144 kb on + strand, within Pf6N2E2_4337 at 5060.145 kb on - strand, within Pf6N2E2_4337
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 5,057,362 + Pf6N2E2_4334 0.79 -0.5 5,057,363 - Pf6N2E2_4334 0.79 +1.3 5,057,657 + +1.7 5,057,657 + -3.5 5,057,657 + +0.9 5,057,658 - +0.9 5,057,658 - +0.9 5,057,658 - -0.8 5,057,778 + Pf6N2E2_4335 0.21 +1.3 5,057,778 + Pf6N2E2_4335 0.21 +1.7 5,057,778 + Pf6N2E2_4335 0.21 -0.3 5,057,778 + Pf6N2E2_4335 0.21 +1.2 5,057,778 + Pf6N2E2_4335 0.21 -2.1 5,057,778 + Pf6N2E2_4335 0.21 +1.6 5,057,778 + Pf6N2E2_4335 0.21 +1.4 5,057,778 + Pf6N2E2_4335 0.21 +0.4 5,057,778 + Pf6N2E2_4335 0.21 +0.9 5,057,779 - Pf6N2E2_4335 0.21 -0.2 5,057,779 - Pf6N2E2_4335 0.21 +1.4 5,057,779 - Pf6N2E2_4335 0.21 +0.6 5,057,779 - Pf6N2E2_4335 0.21 -0.0 5,057,779 - Pf6N2E2_4335 0.21 -0.6 5,058,056 + Pf6N2E2_4335 0.76 -2.6 5,058,099 + Pf6N2E2_4335 0.84 -2.1 5,058,261 + +2.1 5,058,262 - -1.7 5,058,408 + Pf6N2E2_4336 0.14 +1.1 5,058,408 + Pf6N2E2_4336 0.14 +0.6 5,058,408 + Pf6N2E2_4336 0.14 -1.4 5,058,408 + Pf6N2E2_4336 0.14 +1.9 5,058,409 - Pf6N2E2_4336 0.14 +0.5 5,058,409 - Pf6N2E2_4336 0.14 +0.9 5,058,409 - Pf6N2E2_4336 0.14 -0.8 5,058,409 - Pf6N2E2_4336 0.14 +0.6 5,058,409 - Pf6N2E2_4336 0.14 +0.7 5,058,411 + Pf6N2E2_4336 0.14 -0.6 5,058,412 - Pf6N2E2_4336 0.15 +0.4 5,058,412 - Pf6N2E2_4336 0.15 +0.2 5,058,412 - Pf6N2E2_4336 0.15 +1.4 5,058,487 + Pf6N2E2_4336 0.22 +0.6 5,058,487 + Pf6N2E2_4336 0.22 -0.0 5,058,996 + Pf6N2E2_4336 0.70 +1.7 5,058,996 + Pf6N2E2_4336 0.70 +0.5 5,058,996 + Pf6N2E2_4336 0.70 -0.3 5,058,997 - Pf6N2E2_4336 0.71 -1.0 5,058,997 - Pf6N2E2_4336 0.71 +0.4 5,059,239 + +0.8 5,059,240 - -0.4 5,059,399 + -0.7 5,059,400 - +1.4 5,059,434 - +1.1 5,059,460 + +0.9 5,059,463 + +0.1 5,059,464 - +0.3 5,059,464 - +1.7 5,059,464 - +0.5 5,059,464 - +1.1 5,059,464 - -1.9 5,059,464 - +0.3 5,059,468 - +1.0 5,059,482 + +0.0 5,059,483 - +0.7 5,059,483 - +1.2 5,059,483 - -0.1 5,059,487 + +0.9 5,059,487 + -1.7 5,059,488 - +2.1 5,059,488 - -1.0 5,059,488 - -0.0 5,059,501 - +0.6 5,059,511 + -2.2 5,059,511 + +0.3 5,059,512 - -0.0 5,059,596 - +0.2 5,059,596 - +1.1 5,059,700 + -0.1 5,059,701 - +1.5 5,059,736 + +0.6 5,059,736 + +0.5 5,059,736 + +1.8 5,059,742 + +0.5 5,059,742 + +0.3 5,059,742 + +1.0 5,059,742 + -0.0 5,059,742 + +0.0 5,059,742 + +2.3 5,059,742 + -2.5 5,059,742 + +0.1 5,059,742 + +0.7 5,059,742 + +2.0 5,059,742 + +1.5 5,059,743 - +0.7 5,059,743 - +1.0 5,059,743 - -0.9 5,059,743 - +0.6 5,059,743 - +0.2 5,059,743 - +2.0 5,059,743 - -0.1 5,059,743 - -0.2 5,059,743 - -0.9 5,059,746 + +1.2 5,059,746 + -0.2 5,059,747 - +0.2 5,059,747 - +1.3 5,059,747 - +1.4 5,059,747 - -3.1 5,059,834 + -0.0 5,059,884 + Pf6N2E2_4337 0.11 +0.6 5,059,884 + Pf6N2E2_4337 0.11 -0.8 5,059,884 + Pf6N2E2_4337 0.11 +1.9 5,059,885 - Pf6N2E2_4337 0.11 +1.5 5,059,900 - Pf6N2E2_4337 0.12 -0.1 5,059,902 + Pf6N2E2_4337 0.12 +2.2 5,059,902 + Pf6N2E2_4337 0.12 -1.3 5,059,902 + Pf6N2E2_4337 0.12 +2.2 5,059,902 + Pf6N2E2_4337 0.12 +0.7 5,059,902 + Pf6N2E2_4337 0.12 +1.0 5,059,902 + Pf6N2E2_4337 0.12 +0.7 5,059,902 + Pf6N2E2_4337 0.12 +1.0 5,059,902 + Pf6N2E2_4337 0.12 +0.5 5,059,902 + Pf6N2E2_4337 0.12 +0.4 5,059,903 - Pf6N2E2_4337 0.12 +1.7 5,059,903 - Pf6N2E2_4337 0.12 -0.1 5,059,903 - Pf6N2E2_4337 0.12 -0.5 5,059,903 - Pf6N2E2_4337 0.12 -1.1 5,059,903 - Pf6N2E2_4337 0.12 +0.2 5,059,903 - Pf6N2E2_4337 0.12 -0.9 5,059,903 - Pf6N2E2_4337 0.12 +1.1 5,059,903 - Pf6N2E2_4337 0.12 +1.2 5,059,903 - Pf6N2E2_4337 0.12 +0.4 5,059,903 - Pf6N2E2_4337 0.12 -2.2 5,059,907 - Pf6N2E2_4337 0.13 +1.5 5,059,914 - Pf6N2E2_4337 0.13 +1.0 5,059,922 + Pf6N2E2_4337 0.14 -0.7 5,060,013 + Pf6N2E2_4337 0.20 +0.7 5,060,013 + Pf6N2E2_4337 0.20 +0.2 5,060,013 + Pf6N2E2_4337 0.20 -1.1 5,060,014 - Pf6N2E2_4337 0.20 +0.3 5,060,144 + Pf6N2E2_4337 0.28 +0.2 5,060,144 + Pf6N2E2_4337 0.28 +0.9 5,060,144 + Pf6N2E2_4337 0.28 -0.4 5,060,144 + Pf6N2E2_4337 0.28 +0.1 5,060,145 - Pf6N2E2_4337 0.28 -1.6
Or see this region's nucleotide sequence