Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4128 and Pf6N2E2_4129 are separated by 9 nucleotides Pf6N2E2_4129 and Pf6N2E2_4130 are separated by 13 nucleotides Pf6N2E2_4130 and Pf6N2E2_4131 are separated by 115 nucleotides
Pf6N2E2_4128 - hypothetical protein, at 4,807,293 to 4,807,577
_4128
Pf6N2E2_4129 - Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3), at 4,807,587 to 4,808,501
_4129
Pf6N2E2_4130 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 4,808,515 to 4,809,336
_4130
Pf6N2E2_4131 - Sulfate permease, at 4,809,452 to 4,811,020
_4131
Position (kb)
4808
4809
4810 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4807.518 kb on + strand, within Pf6N2E2_4128 at 4807.518 kb on + strand, within Pf6N2E2_4128 at 4807.565 kb on + strand at 4808.524 kb on + strand at 4809.385 kb on - strand at 4809.389 kb on + strand at 4809.389 kb on + strand at 4809.453 kb on + strand at 4809.601 kb on - strand at 4809.675 kb on + strand, within Pf6N2E2_4131 at 4809.675 kb on + strand, within Pf6N2E2_4131 at 4809.676 kb on - strand, within Pf6N2E2_4131 at 4809.676 kb on - strand, within Pf6N2E2_4131 at 4809.775 kb on - strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.804 kb on + strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.805 kb on - strand, within Pf6N2E2_4131 at 4809.857 kb on + strand, within Pf6N2E2_4131 at 4809.885 kb on + strand, within Pf6N2E2_4131 at 4809.886 kb on - strand, within Pf6N2E2_4131 at 4810.056 kb on + strand, within Pf6N2E2_4131 at 4810.056 kb on + strand, within Pf6N2E2_4131 at 4810.056 kb on + strand, within Pf6N2E2_4131 at 4810.057 kb on - strand, within Pf6N2E2_4131
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 4,807,518 + Pf6N2E2_4128 0.79 -2.6 4,807,518 + Pf6N2E2_4128 0.79 +0.2 4,807,565 + +1.1 4,808,524 + +0.9 4,809,385 - -0.2 4,809,389 + +0.6 4,809,389 + +1.4 4,809,453 + +1.5 4,809,601 - +0.4 4,809,675 + Pf6N2E2_4131 0.14 +0.7 4,809,675 + Pf6N2E2_4131 0.14 +0.3 4,809,676 - Pf6N2E2_4131 0.14 +0.2 4,809,676 - Pf6N2E2_4131 0.14 +0.3 4,809,775 - Pf6N2E2_4131 0.21 -0.1 4,809,804 + Pf6N2E2_4131 0.22 +1.5 4,809,804 + Pf6N2E2_4131 0.22 +0.5 4,809,804 + Pf6N2E2_4131 0.22 +1.4 4,809,804 + Pf6N2E2_4131 0.22 -0.2 4,809,804 + Pf6N2E2_4131 0.22 -0.3 4,809,804 + Pf6N2E2_4131 0.22 +0.1 4,809,804 + Pf6N2E2_4131 0.22 +0.6 4,809,804 + Pf6N2E2_4131 0.22 -0.5 4,809,804 + Pf6N2E2_4131 0.22 -1.7 4,809,805 - Pf6N2E2_4131 0.22 +0.8 4,809,805 - Pf6N2E2_4131 0.22 +0.7 4,809,805 - Pf6N2E2_4131 0.22 -0.6 4,809,805 - Pf6N2E2_4131 0.22 -1.2 4,809,805 - Pf6N2E2_4131 0.22 +0.5 4,809,805 - Pf6N2E2_4131 0.22 -0.1 4,809,805 - Pf6N2E2_4131 0.22 +1.3 4,809,805 - Pf6N2E2_4131 0.22 +1.5 4,809,805 - Pf6N2E2_4131 0.22 -0.0 4,809,857 + Pf6N2E2_4131 0.26 -0.3 4,809,885 + Pf6N2E2_4131 0.28 +0.0 4,809,886 - Pf6N2E2_4131 0.28 +1.6 4,810,056 + Pf6N2E2_4131 0.38 -3.9 4,810,056 + Pf6N2E2_4131 0.38 +1.5 4,810,056 + Pf6N2E2_4131 0.38 -3.6 4,810,057 - Pf6N2E2_4131 0.39 +1.3
Or see this region's nucleotide sequence