Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_383 and Pf6N2E2_384 are separated by 58 nucleotides Pf6N2E2_384 and Pf6N2E2_385 are separated by 97 nucleotides
Pf6N2E2_383 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 450,812 to 451,579
_383
Pf6N2E2_384 - Glycine cleavage system transcriptional activator, at 451,638 to 451,979
_384
Pf6N2E2_385 - hypothetical protein, at 452,077 to 452,247
_385
Position (kb)
450
451
452 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 449.879 kb on + strand at 450.008 kb on - strand at 450.008 kb on - strand at 450.008 kb on - strand at 450.008 kb on - strand at 450.010 kb on + strand at 450.011 kb on - strand at 450.011 kb on - strand at 450.052 kb on + strand at 450.053 kb on - strand at 450.053 kb on - strand at 450.222 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.270 kb on + strand at 450.271 kb on - strand at 450.271 kb on - strand at 450.271 kb on - strand at 450.271 kb on - strand at 450.307 kb on + strand at 450.307 kb on + strand at 450.308 kb on - strand at 450.370 kb on + strand at 450.402 kb on + strand at 450.402 kb on + strand at 450.402 kb on + strand at 450.402 kb on + strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.403 kb on - strand at 450.405 kb on - strand at 450.405 kb on - strand at 450.405 kb on - strand at 450.405 kb on - strand at 450.438 kb on + strand at 450.438 kb on + strand at 450.438 kb on + strand at 450.439 kb on - strand at 450.757 kb on + strand at 450.792 kb on + strand at 450.795 kb on + strand at 450.795 kb on + strand at 450.795 kb on + strand at 450.795 kb on + strand at 450.796 kb on - strand at 450.840 kb on + strand at 450.857 kb on - strand at 450.909 kb on + strand, within Pf6N2E2_383 at 450.909 kb on + strand, within Pf6N2E2_383 at 450.910 kb on - strand, within Pf6N2E2_383 at 450.929 kb on - strand, within Pf6N2E2_383 at 451.201 kb on + strand, within Pf6N2E2_383 at 451.201 kb on + strand, within Pf6N2E2_383 at 451.201 kb on + strand, within Pf6N2E2_383 at 451.202 kb on - strand, within Pf6N2E2_383 at 451.427 kb on + strand, within Pf6N2E2_383 at 451.428 kb on - strand, within Pf6N2E2_383 at 451.490 kb on + strand, within Pf6N2E2_383 at 451.490 kb on + strand, within Pf6N2E2_383 at 451.491 kb on - strand, within Pf6N2E2_383 at 451.515 kb on - strand at 451.515 kb on - strand at 451.590 kb on + strand at 451.591 kb on - strand at 451.597 kb on - strand at 451.616 kb on + strand at 451.616 kb on + strand at 451.660 kb on - strand at 451.852 kb on + strand at 451.853 kb on - strand, within Pf6N2E2_384 at 451.853 kb on - strand, within Pf6N2E2_384 at 451.913 kb on - strand, within Pf6N2E2_384 at 452.005 kb on + strand at 452.005 kb on + strand at 452.006 kb on - strand at 452.019 kb on + strand at 452.019 kb on + strand at 452.020 kb on - strand at 452.020 kb on - strand at 452.021 kb on + strand at 452.021 kb on + strand at 452.022 kb on - strand at 452.022 kb on - strand at 452.264 kb on + strand at 452.405 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 449,879 + -0.0 450,008 - +0.7 450,008 - +0.3 450,008 - +0.6 450,008 - -0.6 450,010 + -0.3 450,011 - -3.1 450,011 - +1.3 450,052 + +0.4 450,053 - +1.7 450,053 - +1.3 450,222 + +0.6 450,270 + +0.7 450,270 + -3.3 450,270 + +0.6 450,270 + +0.7 450,270 + +0.7 450,271 - +1.0 450,271 - -0.7 450,271 - +0.2 450,271 - -0.7 450,307 + +0.2 450,307 + -2.7 450,308 - -0.2 450,370 + -1.2 450,402 + +0.2 450,402 + +2.1 450,402 + +3.7 450,402 + -1.8 450,403 - -1.8 450,403 - -0.2 450,403 - +0.8 450,403 - +1.6 450,403 - +0.4 450,403 - +1.3 450,403 - +1.3 450,403 - -0.3 450,405 - +0.1 450,405 - +0.5 450,405 - +0.4 450,405 - -0.6 450,438 + +0.2 450,438 + +0.4 450,438 + +0.1 450,439 - +0.1 450,757 + +0.4 450,792 + +0.3 450,795 + +0.4 450,795 + +0.5 450,795 + -0.1 450,795 + -0.8 450,796 - +1.3 450,840 + +0.0 450,857 - -2.4 450,909 + Pf6N2E2_383 0.13 -2.1 450,909 + Pf6N2E2_383 0.13 -1.1 450,910 - Pf6N2E2_383 0.13 +1.8 450,929 - Pf6N2E2_383 0.15 +1.9 451,201 + Pf6N2E2_383 0.51 +0.7 451,201 + Pf6N2E2_383 0.51 +0.7 451,201 + Pf6N2E2_383 0.51 -0.5 451,202 - Pf6N2E2_383 0.51 +2.5 451,427 + Pf6N2E2_383 0.80 +1.8 451,428 - Pf6N2E2_383 0.80 -0.6 451,490 + Pf6N2E2_383 0.88 +1.3 451,490 + Pf6N2E2_383 0.88 +0.6 451,491 - Pf6N2E2_383 0.88 +1.2 451,515 - +0.7 451,515 - -1.5 451,590 + -1.4 451,591 - +0.0 451,597 - +0.6 451,616 + -1.3 451,616 + +1.6 451,660 - +1.7 451,852 + -0.3 451,853 - Pf6N2E2_384 0.63 -0.7 451,853 - Pf6N2E2_384 0.63 +0.4 451,913 - Pf6N2E2_384 0.80 +2.8 452,005 + +2.9 452,005 + +0.7 452,006 - +0.4 452,019 + -1.3 452,019 + +0.7 452,020 - -0.3 452,020 - +0.2 452,021 + +1.2 452,021 + -0.0 452,022 - -2.3 452,022 - +2.1 452,264 + +0.7 452,405 + +0.2
Or see this region's nucleotide sequence