Experiment: Aluminum chloride 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3298 and Pf6N2E2_3299 are separated by 193 nucleotides
Pf6N2E2_3298 - 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26), at 3,805,568 to 3,807,013
_3298
Pf6N2E2_3299 - 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41), at 3,807,207 to 3,808,118
_3299
Position (kb)
3807
3808
3809 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3806.640 kb on + strand, within Pf6N2E2_3298 at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.985 kb on + strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3806.986 kb on - strand at 3807.026 kb on + strand at 3807.027 kb on - strand at 3807.027 kb on - strand at 3807.042 kb on + strand at 3807.043 kb on - strand at 3807.043 kb on - strand at 3807.043 kb on - strand at 3807.043 kb on - strand at 3807.105 kb on + strand at 3807.166 kb on - strand at 3807.208 kb on + strand at 3807.209 kb on - strand at 3807.250 kb on + strand at 3807.250 kb on + strand at 3807.250 kb on + strand at 3807.250 kb on + strand at 3807.251 kb on - strand at 3807.251 kb on - strand at 3807.373 kb on + strand, within Pf6N2E2_3299 at 3807.374 kb on - strand, within Pf6N2E2_3299 at 3807.439 kb on + strand, within Pf6N2E2_3299 at 3807.487 kb on + strand, within Pf6N2E2_3299 at 3807.488 kb on - strand, within Pf6N2E2_3299 at 3807.512 kb on - strand, within Pf6N2E2_3299 at 3807.553 kb on + strand, within Pf6N2E2_3299 at 3807.554 kb on - strand, within Pf6N2E2_3299 at 3807.697 kb on + strand, within Pf6N2E2_3299 at 3807.698 kb on - strand, within Pf6N2E2_3299 at 3807.779 kb on - strand, within Pf6N2E2_3299 at 3807.779 kb on - strand, within Pf6N2E2_3299 at 3807.832 kb on + strand, within Pf6N2E2_3299 at 3807.833 kb on - strand, within Pf6N2E2_3299 at 3807.833 kb on - strand, within Pf6N2E2_3299 at 3807.925 kb on + strand, within Pf6N2E2_3299 at 3807.992 kb on - strand, within Pf6N2E2_3299 at 3808.021 kb on + strand, within Pf6N2E2_3299 at 3808.021 kb on + strand, within Pf6N2E2_3299 at 3808.021 kb on + strand, within Pf6N2E2_3299 at 3808.196 kb on + strand at 3808.202 kb on - strand at 3808.356 kb on + strand at 3808.499 kb on + strand at 3808.499 kb on + strand at 3808.500 kb on - strand at 3808.669 kb on + strand at 3808.669 kb on + strand at 3808.670 kb on - strand at 3808.670 kb on - strand at 3808.670 kb on - strand at 3808.670 kb on - strand at 3808.670 kb on - strand at 3808.670 kb on - strand at 3808.696 kb on + strand at 3808.697 kb on - strand at 3808.748 kb on + strand at 3808.748 kb on + strand at 3808.748 kb on + strand at 3808.748 kb on + strand at 3808.748 kb on + strand at 3808.748 kb on + strand at 3808.748 kb on + strand at 3808.749 kb on - strand at 3808.749 kb on - strand at 3808.749 kb on - strand at 3808.749 kb on - strand at 3808.749 kb on - strand at 3808.749 kb on - strand at 3808.749 kb on - strand at 3808.808 kb on - strand at 3808.841 kb on + strand at 3808.842 kb on - strand at 3808.855 kb on - strand at 3808.855 kb on - strand at 3808.855 kb on - strand at 3808.965 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 4 mM remove 3,806,640 + Pf6N2E2_3298 0.74 +0.3 3,806,985 + -3.0 3,806,985 + -0.6 3,806,985 + +0.0 3,806,985 + +1.3 3,806,985 + +1.1 3,806,985 + -0.2 3,806,985 + -0.2 3,806,985 + -2.5 3,806,985 + +0.6 3,806,985 + -3.2 3,806,985 + -1.7 3,806,985 + +0.5 3,806,985 + -0.5 3,806,986 - +0.3 3,806,986 - -1.3 3,806,986 - +1.1 3,806,986 - -0.4 3,806,986 - +1.1 3,806,986 - -0.1 3,806,986 - +1.3 3,806,986 - -0.5 3,806,986 - +1.0 3,806,986 - +0.2 3,806,986 - -1.0 3,806,986 - +0.2 3,807,026 + -0.6 3,807,027 - +1.0 3,807,027 - +0.9 3,807,042 + +1.6 3,807,043 - +0.1 3,807,043 - -2.0 3,807,043 - +0.4 3,807,043 - +2.2 3,807,105 + -0.4 3,807,166 - +0.2 3,807,208 + -3.3 3,807,209 - +0.4 3,807,250 + +0.4 3,807,250 + +1.0 3,807,250 + +0.5 3,807,250 + +1.0 3,807,251 - +1.1 3,807,251 - -0.3 3,807,373 + Pf6N2E2_3299 0.18 +1.0 3,807,374 - Pf6N2E2_3299 0.18 +1.0 3,807,439 + Pf6N2E2_3299 0.25 +1.4 3,807,487 + Pf6N2E2_3299 0.31 +1.3 3,807,488 - Pf6N2E2_3299 0.31 -1.1 3,807,512 - Pf6N2E2_3299 0.33 +1.2 3,807,553 + Pf6N2E2_3299 0.38 +0.7 3,807,554 - Pf6N2E2_3299 0.38 +1.3 3,807,697 + Pf6N2E2_3299 0.54 -1.5 3,807,698 - Pf6N2E2_3299 0.54 -0.2 3,807,779 - Pf6N2E2_3299 0.63 -0.1 3,807,779 - Pf6N2E2_3299 0.63 +0.5 3,807,832 + Pf6N2E2_3299 0.69 +1.2 3,807,833 - Pf6N2E2_3299 0.69 +1.5 3,807,833 - Pf6N2E2_3299 0.69 -0.3 3,807,925 + Pf6N2E2_3299 0.79 -0.2 3,807,992 - Pf6N2E2_3299 0.86 -1.2 3,808,021 + Pf6N2E2_3299 0.89 +1.9 3,808,021 + Pf6N2E2_3299 0.89 +1.0 3,808,021 + Pf6N2E2_3299 0.89 +2.3 3,808,196 + -0.8 3,808,202 - +0.7 3,808,356 + -2.6 3,808,499 + -0.4 3,808,499 + +0.9 3,808,500 - -0.1 3,808,669 + -1.7 3,808,669 + +2.3 3,808,670 - -0.6 3,808,670 - +0.2 3,808,670 - -1.2 3,808,670 - +1.2 3,808,670 - -1.1 3,808,670 - -0.1 3,808,696 + -2.5 3,808,697 - +0.9 3,808,748 + -0.4 3,808,748 + -0.2 3,808,748 + +1.5 3,808,748 + -0.7 3,808,748 + -0.3 3,808,748 + +1.7 3,808,748 + -0.7 3,808,749 - -3.0 3,808,749 - +0.8 3,808,749 - +2.8 3,808,749 - -1.0 3,808,749 - -0.4 3,808,749 - +0.3 3,808,749 - -0.7 3,808,808 - +0.8 3,808,841 + -0.5 3,808,842 - +0.6 3,808,855 - +0.9 3,808,855 - -0.1 3,808,855 - -1.2 3,808,965 - -0.4
Or see this region's nucleotide sequence